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Job DescriptionQ9BUP3
Confidence98.80%DateSat Jun 16 10:42:12 BST 2012
Rank273Aligned Residues203
% Identity14%Templated2fr1a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.79

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50...... ...60.........70.........80..
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Query Sequence  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT. . . . . . . . . . . . . . FDEEAYKNVNQEVVDFEKLDDYASAF
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Template Sequence  PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD
Template Known Secondary structure 

STTTST
SSSGGGSTTTT


TT
TS
TT
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   1664.....1670.........1680.........1690.........1700.........1710.........1720.........1730.........1740...
 
   83......90.........100...... ...110.........120.........130... ......140.........150...
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Query Sequence  QGHDVGFCCLGTTRGKAGAEGFVR. . . . . . . VDRDYVLKSAELAKAGGCKHFNLLSSK. . GADKSSNFLYLQVKGEVEAK
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Template Sequence  VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL
Template Known Secondary structure  S









GGG

TTTS

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TTT
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   1744.....1750.........1760.........1770.........1780.........1790.........1800.........1810.........1820...
 
   154 .....160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  V. . EELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIH
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Template Sequence  AQQRRSDGLPATAVAWGTW. . . . . . . . . . . . . . . . . . . . . AFRRHGVIEMPPETACRALQNALDRAEVCPI. . VIDVRWD
Template Known Secondary structure  TT




B.....................

TTTT
B
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   1824.....1830.........1840.. .......1850.........1860.........1870... ......1880
 
   232.......240..
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Query Sequence  DLGKAHGSLKP
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Template Sequence  RFLLAYTAQRP
Template Known Secondary structure  TSSS
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   1893......1900...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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