Job Description Q9BUP3 Confidence 98.37% Date Sat Jun 16 10:42:12 BST 2012 Rank 300 Aligned Residues 184 % Identity 13% Template d1wmaa1 SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases Resolution 1.24

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																									.																			.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																			.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	.	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	.	.	.	.	.	.	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.																			.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.			.	.															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		H	V	A	L	V	T	G	G	N	K	G	I	G	L	A	I	V	R	D	L	C	R	L	F	S	G	.	.	D	V	V	L	T	A	R	D	V	T	R	G	Q	A	A	V	Q	Q	L	Q	A	E	G	L	S	P	R	F	H	Q	L	D	I	D	D	L	Q	S	I	R	A	L	R	D	F	L	R	K	E	Y	G	G
Template Known Secondary structure							S	S		S	S														S	S	S	.	.							S	S														T	T										T	T																	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	V	L	V	N	N	A	G	I	A	F	K	V	A	D	P	T	P	F	H	I	Q	A	E	V	T	M	K	T	N	F	F	G	T	R	D	V	C	T	E	L	L	P	L	I	K	P	Q	G	R	V	V	N	V	S	S	I	M	S	V	R	A	L	K	S	C	S	P	E	L	Q	Q	K	F	R	S	E	T	I
Template Known Secondary structure															T	T			S														T											G	G	G																					T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																								135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	.	.	.	.	.	.	.	.	.	.	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		T	E	E	E	L	V	G	L	M	N	K	F	V	E	D	T	K	K	G	V	H	Q	K	E	G	W	P	S	S	A	Y	G	V	T	K	I	G	V	T	V	L	S	R	I	H	A	R	K	L	S	E	Q	R	K	G	D	K	I	L	L	N	A	C	C	P	G	W	V	R	T	D	M	A	G	P	.	.	.	.	.
Template Known Secondary structure																			T	T		T	T	T	T	T			S																										T	T	S											S	B		S	T	T	T		T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	.	.	.	.	D	K	Q	M	E	L
Query Conservation																																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	T	K	S	P	E	E	G	A	E	T	P	V	Y	L	A	L	L	P	P	D	A	E	G	P	H	G	Q	F	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S	B						T								S			T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions