Return to main results Retrieve Phyre Job Id

Job DescriptionQ9BUP3
Confidence99.72%DateSat Jun 16 10:42:12 BST 2012
Rank81Aligned Residues224
% Identity13%Templated1rpna_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50...... ...60.........70.........80.........90....
Predicted Secondary structure 













....























Query SS confidence 





































. . . .





































Query Sequence  KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT. . . . FDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT
Query Conservation 
 







 

  
   
   
  
 
    
    ....                               

     
Alig confidence 





































....





































Template Conservation 
 










  

  

  
  
    
                  
  
  

 
                    
Template Sequence  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA
Template Known Secondary structure 
TTTSTT



SS


TT
GGG

TT


S

Template Predicted Secondary structure 






























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   95....100..... ....110.........120.........130....... ..140.........150..
Predicted Secondary structure 










......










................


Query SS confidence 










. . . . . .































. . . . . . . . . . . . . . . .














Query Sequence  TRGKAGAEGFV. . . . . . RVDRDYVLKSAELAKAGGCKHFNLLSSKGADK. . . . . . . . . . . . . . . . SSNFLYLQVKGEVEA
Query Conservation             ......                         
      ................               
Alig confidence 










......































................














Template Conservation                                                                                  
Template Sequence  AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV
Template Known Secondary structure  S


TTST
TTSGGGG
S
SSSSB
TTS




S
Template Predicted Secondary structure 

































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   153......160.........170.........180....... ..190.........200.........210.........220..
Predicted Secondary structure 











..........
















Query SS confidence 


































. . . . . . . . . .


































Query Sequence  KVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKF. . . . . . . . . . FGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQM
Query Conservation             
 

    
               ..........             
   


 
             
Alig confidence 


































..........


































Template Conservation               
     
                                                            
Template Sequence  NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKADDY
Template Known Secondary structure 





TTS
TTSTTS
S
S
TT

SSS


Template Predicted Secondary structure 














































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   223.... ..230.........240..
Predicted Secondary structure 
......




Query SS confidence 




. . . . . .














Query Sequence  ELLEN. . . . . . KAIHDLGKAHGSLKP
Query Conservation    
  ......  
  
    
   
Alig confidence 




......














Template Conservation             
    
    
    
Template Sequence  VVATGVTTTVRDMCQIAFEHVGLDYR
Template Known Secondary structure 

S
TTT

GG
Template Predicted Secondary structure 









Template SS confidence 

























   243......250.........260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions