Job Description Q9BUP3 Confidence 99.89% Date Sat Jun 16 10:42:12 BST 2012 Rank 13 Aligned Residues 195 % Identity 18% Template d1hdoa_ SCOP info NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases Resolution 1.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		M	A	V	K	K	I	A	I	F	G	A	T	G	Q	T	G	L	T	T	L	A	Q	A	V	Q	A	G	Y	.	.	E	V	T	V	L	V	R	D	S	S	R	L	P	S	E	G	P	R	P	A	H	V	V	V	G	D	V	L	Q	A	A	D	V	D	K	T	V	A	G	Q	D	A	V	I	V	L	L	G	T	R
Template Known Secondary structure											S	T	T	S													T	T		.	.							S		G	G	G	S		S	S	S				S					S		T	T	S									T	T		S									T
Template Predicted Secondary structure																														.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	F	D	R	Y	S	V	F	R	P	G	V	L
Query Conservation																																											.	.	.	.	.
Alig confidence									.	.	.	.																															.	.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		N	D	L	S	P	T	T	.	.	.	.	V	M	S	E	G	A	R	N	I	V	A	A	M	K	A	H	G	V	D	K	V	V	A	C	T	S	A	F	L	L	W	D	P	T	K	V	P	P	R	L	Q	A	V	T	D	D	H	I	R	M	H	K	V	L	R	E	S	G	L	K	Y	V	A	V	M	P	P	H	I
Template Known Secondary structure		T			S				.	.	.	.																	T										G	G	G	T	S		T	T		S		G	G	G																	T		S								S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		G	D	Q	P	L	T	G	.	.	.	.	.	.	.	.	.	A	Y	T	V	T	L	D	G	R	G	P	S	R	V	I	S	K	H	D	L	G	H	F	M	L	R	C	L	T	T	D	E	Y	D	G	H	S	T	Y
Template Known Secondary structure								S	.	.	.	.	.	.	.	.	.						S	S	S		S	S		S														T	T	S		S	T	T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions