Job Description Q9BUP3 Confidence 98.72% Date Sat Jun 16 10:42:12 BST 2012 Rank 280 Aligned Residues 187 % Identity 16% Template c4e3zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase protein; PDBTitle: crystal structure of a oxidoreductase from rhizobium etli cfn 42 Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	.	.	.	.	.	.	.	.	.	.	.	.	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	P	V	V	L	V	T	G	G	S	R	G	I	G	A	A	V	C	R	L	A	A	R	Q	G	W	R	V	G	V	N	Y	A	A	N	R	E	A	A	D	A	V	V	A	A	I	T	E	S	G	G	E	A	V	A	I	P	G	D	V	G	N	A	A	D	I	A	A	X	F	S	A	V	D	R	Q	F	G	R
Template Known Secondary structure			S						T	T	T	T	S													T	T								S	S															T	T										T	T																	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	G	G	C	K	H	F	N	L	L	S	S	.	.	.	K	G	A	D	K	S	S	N	F	L	Y	L	Q	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		L	D	G	L	V	N	N	A	G	I	V	D	Y	P	Q	R	V	D	E	X	S	V	E	R	I	E	R	X	L	R	V	N	V	T	G	S	I	L	C	A	A	E	A	V	R	R	X	S	R	L	Y	S	G	Q	G	G	A	I	V	N	V	S	S	X	A	A	I	L	G	S	A	T	Q	Y	V	D	Y	A	A	S
Template Known Secondary structure																		G	G	G														T																G	G	G	T												T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		147	.	.	150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																																													.	.
Query SS confidence														.	.	.	.	.	.																																																													.	.
Query Sequence		K	G	E	V	E	A	K	V	E	E	L	K	.	.	.	.	.	.	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	.	.
Query Conservation														.	.	.	.	.	.																																																													.	.
Alig confidence														.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	A	I	D	T	F	T	I	G	L	A	R	E	V	A	A	E	G	I	R	V	N	A	V	R	P	G	I	I	E	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	X	Q	R	A	G	X	P	E	E	V	A	D	A	I	L	Y	L	L	S	P	S	A	S	Y
Template Known Secondary structure																	G	G	G	T										S	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S		B														S	G	G	G	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		219	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	Q	M	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	S	I	L	N
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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