Job Description Q9BUP3 Confidence 99.23% Date Sat Jun 16 10:42:12 BST 2012 Rank 112 Aligned Residues 211 % Identity 10% Template c4dqxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable oxidoreductase protein; PDBTitle: crystal structure of a short chain dehydrogenase from rhizobium etli2 cfn 42 Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence		R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	.	.	.	.	.	.	.	.	Q	G	H	D
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	N	Q	R	V	C	I	V	T	G	G	G	S	G	I	G	R	A	T	A	E	L	F	A	K	N	G	A	Y	V	V	V	A	D	V	N	E	D	A	A	V	R	V	A	N	E	I	G	S	K	A	F	G	V	R	V	D	V	S	S	A	K	D	A	E	S	X	V	E	K	T	T	A	K	W	G	R	V	D
Template Known Secondary structure		T	T	T	T							T	T	T	S													T	T								S	S													T	T								T	T																	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	.	.	.	.	.	.	.	.	.	.	.	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	.	.	G	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		V	L	V	N	N	A	G	F	G	T	T	G	N	V	V	T	I	P	E	E	T	W	D	R	I	X	S	V	N	V	K	G	I	F	L	C	S	K	Y	V	I	P	V	X	R	R	N	G	G	G	S	I	I	N	T	T	S	Y	T	A	T	S	A	I	A	D	R	T	A	Y	V	A	S	K	G	A	I	S	S	L
Template Known Secondary structure													B		T	T	T	S													T																	T	T										G	G	G	T	S			S	S	B
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		154	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																																															.	.	.
Query SS confidence					.	.	.	.	.	.																																																															.	.	.
Query Sequence		V	E	E	.	.	.	.	.	.	L	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	.	.	.	D	K	Q	M	E	L
Query Conservation					.	.	.	.	.	.																																																															.	.	.
Alig confidence					.	.	.	.	.	.																																										.	.																				.	.	.
Template Conservation																																																				.	.
Template Sequence		T	R	A	X	A	X	D	H	A	K	E	G	I	R	V	N	A	V	A	P	G	T	I	D	S	P	Y	F	T	K	I	F	A	D	P	A	K	L	R	S	D	F	N	A	R	A	V	X	D	R	.	.	X	G	T	A	E	E	I	A	E	A	X	L	F	L	A	S	D	R	S	R	F	A	T	G	S	I	L	T
Template Known Secondary structure										G	G	G	T											B																					T	T	S	T	T	S	S	.	.		B														S	G	G	G	T	T			S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		225	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	G
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions