Job Description Q9BUP3 Confidence 99.22% Date Sat Jun 16 10:42:12 BST 2012 Rank 114 Aligned Residues 202 % Identity 15% Template c4dmmA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: 3-oxoacyl-[acyl-carrier-protein] reductase from synechococcus2 elongatus pcc 7942 in complex with nadp Resolution 2.38 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																													.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		F	R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	.	.	.	.	.	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.																											.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	L	T	D	R	I	A	L	V	T	G	A	S	R	G	I	G	R	A	I	A	L	E	L	A	A	A	G	A	K	V	A	V	N	Y	A	S	S	A	G	A	A	D	E	V	V	A	A	I	A	A	A	G	G	E	A	F	A	V	K	A	D	V	S	Q	E	S	E	V	E	A	L	F	A	A	V	I	E	R
Template Known Secondary structure			T	T	T	T						T	T		S	S													T	T								S	S															T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
			83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.														.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G
Query Conservation		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	G	R	L	D	V	L	V	N	N	A	G	I	T	R	D	T	L	L	L	R	M	K	R	D	D	W	Q	S	V	L	D	L	N	L	G	G	V	F	L	C	S	R	A	A	A	K	I	M	L	K	Q	R	S	G	R	I	I	N	I	A	S	V	V	G	E	M	G	N	P	G	Q	A	N	Y	S	A	A	K	A
Template Known Secondary structure			S																	G	G	G														T																		T																	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		149	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		E	V	E	A	K	V	E	E	L	.	.	.	.	.	.	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.
Template Sequence		G	V	I	G	L	T	K	T	V	A	K	E	L	A	S	R	G	I	T	V	N	A	V	A	P	G	F	I	A	T	D	M	T	S	E	L	A	A	E	K	L	L	E	V	I	P	L	G	.	.	.	.	.	.	.	.	R	Y	G	E	A	A	E	V	A	G	V	V	R	F	L	A	A	D	P	A	A	A	Y	I
Template Known Secondary structure															G	G	G	T											B	T	T	S		S									G	G	G		T	T	S	.	.	.	.	.	.	.	.	S		B																G	G	G	G	G
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.									.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		223
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions