Job Description Q9BUP3 Confidence 98.90% Date Sat Jun 16 10:42:12 BST 2012 Rank 254 Aligned Residues 175 % Identity 14% Template c4da9C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:short-chain dehydrogenase/reductase; PDBTitle: crystal structure of putative short-chain dehydrogenase/reductase from2 sinorhizobium meliloti 1021 Resolution 2.50 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.								.
Predicted Secondary structure																																										.	.	.	.	.																												.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.																												.	.	.	.	.	.	.
Query Sequence		Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	.	.	.	.	.	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	.	.	.	.	.	.	.	G
Query Conservation																																										.	.	.	.	.																												.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	P	V	A	I	V	T	G	G	R	R	G	I	G	L	G	I	A	R	A	L	A	A	S	G	F	D	I	A	I	T	G	I	G	D	A	E	G	V	A	P	V	I	A	E	L	S	G	L	G	A	R	V	I	F	L	R	A	D	L	A	D	L	S	S	H	Q	A	T	V	D	A	V	V	A	E	F	G	R
Template Known Secondary structure										T	T	T	S													T	T								S	S		S	T	T											T	T										T	T	S	G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	.	.	.	.	.	.	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	C	L	V	N	N	A	G	R	D	D	F	L	D	L	K	P	E	N	F	D	T	I	V	G	V	N	L	R	G	T	V	F	F	T	Q	A	V	L	K	A	X	L	A	S	D	A	R	A	S	R	S	I	I	N	I	T	S	V	E	R	L	D	Y	C	X	S	K	A	G	L	A	A	F	S	Q	G	L	A
Template Known Secondary structure														G	G	G										T	T	T																		T	S			S		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
								159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	L	A	E	T	G	I	A	V	F	E	V	R	P	G	I	I	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	G	E	P	E	D	I	G	N	I	V	A	G	L	A	G	G	Q
Template Known Secondary structure					T	T	T	T											B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B														T	S	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions