Job Description Q9BUP3 Confidence 99.85% Date Sat Jun 16 10:42:12 BST 2012 Rank 28 Aligned Residues 222 % Identity 13% Template c3vpsB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of a novel nad dependent-ndp-hexosamine 5,6-dehydratase,2 tuna, involved in tunicamycin biosynthesis Resolution 1.90 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		H	R	I	L	I	T	G	G	A	G	F	I	G	G	H	L	A	R	A	L	V	A	S	G	E	.	.	E	V	T	V	L	D	D	L	R	V	P	P	M	I	P	P	E	G	T	G	K	F	L	E	K	P	V	L	E	L	E	E	R	D	L	S	D	V	R	L	V	Y	H	L	A	S	H	K	S	V	P	R	S
Template Known Secondary structure								T	T	T	S													T	T		.	.									S	S			S	S				S	S	S					S		G	G	G			G	G	G	T	T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	.	.	.	.	K	F	D	R
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		F	K	Q	P	L	D	Y	L	D	N	V	D	S	G	R	H	L	L	A	L	C	T	S	V	G	V	P	K	V	V	V	G	S	T	C	E	V	Y	G	Q	A	D	T	L	P	T	P	E	D	S	P	L	S	P	R	S	P	Y	A	A	S	K	V	G	L	E	M	V	A	G	A	H	Q	R	A	S	V	A	P	E
Template Known Secondary structure		T	T	S	G	G	G	G																		T		S								G	G	G	G		S		S	S	S	S	B		T	T							S																			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																																				.	.
Query SS confidence																		.	.	.	.	.	.																																																				.	.
Query Sequence		Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	.	.	.	.	.	.	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E	N	K	.	.	A	I	H	D	L
Query Conservation																		.	.	.	.	.	.																																																				.	.
Alig confidence																		.	.	.	.	.	.																																																				.	.
Template Conservation
Template Sequence		V	G	I	V	R	F	F	N	V	Y	G	P	G	E	R	P	D	A	L	V	P	R	L	C	A	N	L	L	T	R	N	E	L	P	V	E	G	D	G	E	Q	R	R	D	F	T	Y	I	T	D	V	V	D	K	L	V	A	L	A	N	R	P	L	P	S	V	V	N	F	G	S	G	Q	S	L	S	V	N	D	V
Template Known Secondary structure												S	T	T			T	T	S													S						T	T	S																				T	T	S				S					S		S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		234	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	H	G	S	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	I	L	Q	A	T	S	P
Template Known Secondary structure							T	T		T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions