Job Description Q9BUP3 Confidence 99.16% Date Sat Jun 16 10:42:12 BST 2012 Rank 143 Aligned Residues 208 % Identity 13% Template c3uf0A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy) Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		F	R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	.	.	.	.	.	.	.	.	.	Q	G
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	S	L	A	G	R	T	A	V	V	T	G	A	G	S	G	I	G	R	A	I	A	H	G	Y	A	R	A	G	A	H	V	L	A	W	G	R	T	D	G	V	K	E	V	A	D	E	I	A	D	G	G	G	S	A	E	A	V	V	A	D	L	A	D	L	E	G	A	A	N	V	A	E	E	L	A	A	T	R	R
Template Known Secondary structure		T			T	T							T	T	T	S													T	T								S	S	T											T	T	T										T	T																S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.													120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	V	L	V	N	N	A	G	I	I	A	R	A	P	A	E	E	V	S	L	G	R	W	R	E	V	L	T	V	N	L	D	A	A	W	V	L	S	R	S	F	G	T	A	M	L	A	H	G	S	G	R	I	V	T	I	A	S	M	L	S	F	Q	G	G	R	N	V	A	A	Y	A	A	S	K	H	A	V	V
Template Known Secondary structure																	G	G	G														T																		T										G	G	G	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		153	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																									.																																			.	.
Query SS confidence						.	.	.	.	.	.	.																									.																																			.	.
Query Sequence		K	V	E	E	.	.	.	.	.	.	.	L	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	.	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	.	.	V	R	P	R	D	K	Q	M
Query Conservation						.	.	.	.	.	.	.																									.																																			.	.
Alig confidence						.	.	.	.	.	.	.																									.														.	.	.	.																		.	.
Template Conservation																																																			.	.	.	.
Template Sequence		G	L	T	R	A	L	A	S	E	W	A	G	R	G	V	G	V	N	A	L	A	P	G	Y	V	V	T	A	N	T	A	A	L	R	A	D	D	E	R	A	A	E	I	T	A	R	I	P	A	.	.	.	.	G	R	W	A	T	P	E	D	M	V	G	P	A	V	F	L	A	S	D	A	A	S	Y	V	H	G	Q
Template Known Secondary structure												G	G	G	T										S	B		S	G	G	G					T	S											S	T	T	.	.	.	.	S	S		B		G	G	G	G									S	G	G	G	T	T			S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		223	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		241	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions