Job Description Q9BUP3 Confidence 99.69% Date Sat Jun 16 10:42:12 BST 2012 Rank 87 Aligned Residues 204 % Identity 16% Template c3slgB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pbgp3 protein; PDBTitle: crystal structure of pbgp3 protein from burkholderia pseudomallei Resolution 2.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	.	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T
Query Conservation																												.
Alig confidence																												.															.
Template Conservation																																											.
Template Sequence		K	A	K	K	V	L	I	L	G	V	N	G	F	I	G	H	H	L	S	K	R	I	L	E	T	T	D	W	E	V	F	G	M	D	M	Q	T	D	R	L	G	.	D	L	V	K	H	E	R	M	H	F	F	E	G	D	I	T	I	N	K	E	W	V	E	Y	H	V	K	K	C	D	V	I	L	P	L	V	A	I
Template Known Secondary structure										S		S	S																							S			T	T	S	G	.	G	G	G	G	S	T	T								T	T	T													S						B
Template Predicted Secondary structure																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		96	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure										.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	K	A	G	A	E	G	.	.	.	.	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A
Query Conservation										.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	P	A	T	Y	V	K	Q	P	L	R	V	F	E	L	D	F	E	A	N	L	P	I	V	R	S	A	V	K	Y	G	K	H	L	V	F	P	S	T	S	E	V	Y	G	M	C	A	D	E	Q	F	D	P	D	A	S	A	L	T	Y	G	P	I	N	K	P	R	W	I	Y	A	C	S	K	Q	L	M	D	R
Template Known Secondary structure																			T	T	T	T											T									G	G	G	G	B	S				S	S	B		T	T	T				B				T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		153	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.															.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure				.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	.	.	E	E	L	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R
Query Conservation				.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	W	G	Y	G	M	E	G	L	N	F	T	L	F	R	P	F	N	W	I	G	P	G	L	D	S	I	Y	T	P	K	E	G	S	S	R	V	V	T	Q	F	L	G	H	I	V	R	G	E	N	I	S	L	V	D	G	G	S	Q	K	R	A	F	T	Y	V	D	D	G	I	S	A	L	M	K	I	I	E	N
Template Known Secondary structure								T	T	T										S				S	S				T	T			B	S		S													T	T						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		217	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	D	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	G	V	A
Template Known Secondary structure		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions