Job Description Q9BUP3 Confidence 99.79% Date Sat Jun 16 10:42:12 BST 2012 Rank 63 Aligned Residues 209 % Identity 12% Template c3sc6F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:dtdp-4-dehydrorhamnose reductase; PDBTitle: 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose2 reductase (rfbd) from bacillus anthracis str. ames in complex with3 nadp Resolution 2.65 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	.	.	D	V	G	F	C	C	L	G
Query Conservation																																																																								.	.
Alig confidence				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	.	E	R	V	I	I	T	G	A	N	G	Q	L	G	K	Q	L	Q	E	E	L	N	P	E	E	Y	D	I	Y	P	F	D	K	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	I	T	N	I	S	Q	V	Q	Q	V	V	Q	E	I	R	P	H	I	I	I	H	C	A	A
Template Known Secondary structure				.							T	T	T	S										S		T	T	T								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T															S
Template Predicted Secondary structure				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.															.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	F
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	K	V	D	Q	A	E	K	E	R	D	L	A	Y	V	I	N	A	I	G	A	R	N	V	A	V	A	S	Q	L	V	G	A	K	L	V	Y	I	S	T	D	Y	V	F	Q	G	D	R	P	E	G	Y	D	E	F	H	N	P	A	P	I	N	I	Y	G	A	S	K	Y	A	G	E	Q	F	V	K	E	L	H
Template Known Secondary structure					T	T	G	G	G	T										T														T									S	T	T	S					S	S		B		T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.
Predicted Secondary structure																					.	.																																																		.	.	.	.	.	.
Query SS confidence																					.	.																																																		.	.	.	.	.	.
Query Sequence		D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	.	.	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E	N	.	.	.	.	.	.	K	A	I	H
Query Conservation																					.	.																																																		.	.	.	.	.	.
Alig confidence																					.	.																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	Y	F	I	V	R	T	S	W	L	Y	G	K	Y	G	N	N	F	V	K	T	M	I	R	L	G	K	E	R	E	E	I	S	V	V	A	D	Q	I	G	S	P	T	Y	V	A	D	L	N	V	M	I	N	K	L	I	H	T	S	L	Y	G	T	Y	H	V	S	N	T	G	S	C	S	W	F	E	F	A	K
Template Known Secondary structure		S	S								S				S	S	S															S							S																			T	T	T											B	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		232	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	G	K	A	H	G	S	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	F	S	Y	A	N	M	K	V	N
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions