Job Description Q9BUP3 Confidence 99.22% Date Sat Jun 16 10:42:12 BST 2012 Rank 115 Aligned Residues 209 % Identity 22% Template c3rkuC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:oxidoreductase ymr226c; PDBTitle: substrate fingerprint and the structure of nadp+ dependent serine2 dehydrogenase from saccharomyces cerevisiae complexed with nadp+ Resolution 2.60 Å

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		7	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure									.																																.																.	.	.	.	.	.	.	.
Query SS confidence									.																																.																.	.	.	.	.	.	.	.
Query Sequence		L	S	K	L	R	E	D	.	F	R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	.	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	.	.	.	.	.	.	.	.	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D
Query Conservation									.																																.																.	.	.	.	.	.	.	.
Alig confidence									.																																.																.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	Q	G	R	K	A	A	E	R	L	A	K	K	T	V	L	I	T	G	A	S	A	G	I	G	K	A	T	A	L	E	Y	L	E	A	S	N	G	D	M	K	L	I	L	A	A	R	R	L	E	K	L	E	E	L	K	K	T	I	D	Q	E	F	P	N	A	K	V	H	V	A	Q	L	D	I	T	Q	A	E
Template Known Secondary structure			T	T									T	T							S	T	T	S													T	T	T	T									S																	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		77	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	A	S	A	F	.	.	.	.	.	.	.	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A
Query Conservation								.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	K	P	F	I	E	N	L	P	Q	E	F	K	D	I	D	I	L	V	N	N	A	G	K	A	L	G	S	D	R	V	G	Q	I	A	T	E	D	I	Q	D	V	F	D	T	N	V	T	A	L	I	N	I	T	Q	A	V	L	P	I	F	Q	A	K	N	S	G	D	I	V	N	L	G	S	I	A	G	R	D
Template Known Secondary structure									T	S		G	G	G		S																	T	T	S														T																		T										G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	.	.	.	.	.	.	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A
Query Conservation																								.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		A	Y	P	T	G	S	I	Y	C	A	S	K	F	A	V	G	A	F	T	D	S	L	R	K	E	L	I	N	T	K	I	R	V	I	L	I	A	P	G	L	V	E	T	E	.	.	.	.	.	F	S	L	V	R	Y	R	G	N	E	E	Q	A	K	N	V	Y	K	D	T	T	P	L	M	A	D	D	V	A	D	L
Template Known Secondary structure				T	T																						T	T	T	S	S									S				S	S	.	.	.	.	.						T	T	T										T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	N	N	V	V	R	P	R	D	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	Y	A	T	S	R	K	Q	N	T
Template Known Secondary structure							T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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