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Job DescriptionQ9BUP3
Confidence98.34%DateSat Jun 16 10:42:12 BST 2012
Rank302Aligned Residues215
% Identity16%Templatec3mjsA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:amphb; PDBTitle: structure of a-type ketoreductases from modular polyketide synthase
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.. .......70.........80....
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Query Sequence  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY. . . . . . . . . KNVNQEVVDFEKLDDYASAFQG. . .
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Template Sequence  VHGSVLVTGGTGGIGGRVARRLAEQGAA. HLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE
Template Known Secondary structure 

STTTSTT
S.SSGGGSTTTT


TT
TS
T
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   217..220.........230.........240.... .....250.........260.........270.........280.........290.....
 
   85....90........ .100.........110.........120.........130... ......140.........
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Query Sequence  . . . . HDVGFCCLGTTRGK. . . . . . . AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK. . . . GADKSSNFLYLQVKGE
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Template Sequence  DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLD
Template Known Secondary structure  TS






S


TTT

TTTGGG

ST

TT
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   296...300.........310.........320.........330.........340.........350.........360.........370.....
 
   150.........160.........170.........180.........190.........200.........210.........220.........
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Query Sequence  VEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKA
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Template Sequence  ALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVL. . . . . . . . AMEPEHALGALDQMLENDD. . TAAAITLMD
Template Known Secondary structure  TT



SSSSTT
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   376...380.........390.........400.........410....... ..420.........430...... ...440.....
 
   230.........240..
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Query Sequence  IHDLGKAHGSLKP
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Template Sequence  WEMFAPAFTANRP
Template Known Secondary structure  TSSS
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   446...450........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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