Job Description Q9BUP3 Confidence 99.83% Date Sat Jun 16 10:42:12 BST 2012 Rank 37 Aligned Residues 234 % Identity 12% Template c3lu1C_ PDB info PDB header:isomerase Chain: C: PDB Molecule:wbgu; PDBTitle: crystal structure analysis of wbgu: a udp-galnac 4-epimerase Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		K	L	R	E	D	F	R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	.	.	.	.	.	.	.	.	.	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	T	Q	Q	L	I	F	S	P	K	T	W	L	I	T	G	V	A	G	F	I	G	S	N	L	L	E	K	L	L	K	L	N	Q	V	V	I	G	L	D	N	F	S	T	G	H	Q	Y	N	L	D	E	V	K	T	L	V	S	T	E	Q	W	S	R	F	C	F	I	E	G	D	I	R	D	L	T	T	C	E
Template Known Secondary structure										S								T	T	T	S													T	T									S	S	S													S						T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	K	S	S	N	F	L	Y
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	M	K	G	V	D	H	V	L	H	Q	A	A	L	G	S	V	P	R	S	I	V	D	P	I	T	T	N	A	T	N	I	T	G	F	L	N	I	L	H	A	A	K	N	A	Q	V	Q	S	F	T	Y	A	A	S	S	S	T	Y	G	D	H	P	A	L	P	K	V	E	E	N	I	G	N	P	L	S	P	Y
Template Known Secondary structure			T	T	T	T		S																										T														T		S								G	G	G	G	T	T				S	S	B		T	T							S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	.	.	.	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	.	.	.	.	.	.	.	.	.	.	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M
Query Conservation																	.	.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	T	K	Y	V	N	E	I	Y	A	Q	V	Y	A	R	T	Y	G	F	K	T	I	G	L	R	Y	F	N	V	F	G	R	R	Q	D	P	N	G	A	Y	A	A	V	I	P	K	W	T	A	A	M	L	K	G	D	D	V	Y	I	N	G	D	G	E	T	S	R	D	F	C	Y	I	D	N	V	I	Q	M	N
Template Known Secondary structure																														S			S	T	T					S	T	T														T							S		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.										.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E	.	.	.	.	.	.	.	.	.	N	K	A	I	H	D	L	G	K	A	H	G	S	L	K	P
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	S	A	L	A	K	D	S	A	K	D	N	I	Y	N	V	A	V	G	D	R	T	T	L	N	E	L	S	G	Y	I	Y	D	E	L	N	L	I	H	H
Template Known Secondary structure						T			G	G	G		S						S		S																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions