Job Description Q9BUP3 Confidence 99.18% Date Sat Jun 16 10:42:12 BST 2012 Rank 133 Aligned Residues 211 % Identity 13% Template c3kvoB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2) Resolution 2.25 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.												.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	E	D	F	R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	.	.	.	.	.	.	.	.	.	.	.	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	N	T	G	R	L	A	G	C	T	V	F	I	T	G	A	S	R	G	I	G	K	A	I	A	L	K	A	A	K	D	G	A	N	I	V	I	A	A	K	T	A	Q	P	H	P	K	L	L	G	T	I	Y	T	A	A	E	E	I	E	A	V	G	G	K	A	L	P	C	I	V	D	V	R	D	E	Q	Q	I
Template Known Secondary structure						S	T	T	T	T							T		S	S												T	T	T								S		S	S			S	S	S															T										T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		79	80	.	.	.								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.												.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence							.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		A	S	A	F	Q	.	.	.	.	.	.	.	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	.	.	.	.	.	.	.	.	.	.	.	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	S	.	.
Query Conservation							.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence							.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		S	A	A	V	E	K	A	I	K	K	F	G	G	I	D	I	L	V	N	N	A	S	A	I	S	L	T	N	T	L	D	T	P	T	K	R	L	D	L	M	M	N	V	N	T	R	G	T	Y	L	A	S	K	A	C	I	P	Y	L	K	K	S	K	V	A	H	I	L	N	I	S	P	P	L	N	L	N	P	V	W
Template Known Secondary structure													S																	T	T	T	S												T																T	T		S	S														T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
				139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.																				.	.	.	.	.
Query SS confidence		.	.																				.	.	.	.	.
Query Sequence		.	.	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	.	.	.	.	.	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L
Query Conservation		.	.																				.	.	.	.	.
Alig confidence		.	.																				.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	Q	H	C	A	Y	T	I	A	K	Y	G	M	S	M	Y	V	L	G	M	A	E	E	F	K	G	E	I	A	V	N	A	L	W	P	K	T	A	I	H	T	A	.	.	.	.	.	.	.	.	.	.	.	.	A	M	D	M	L	G	G	P	G	I	E	S	Q	C	R	K	V	D	I	I	A	D	A	A	Y
Template Known Secondary structure				S	S																					T	T	T	T									S	B		B				.	.	.	.	.	.	.	.	.	.	.	.								T	T	G	G	G	G		B
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.													.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		N	N	V	V	R	P	R	D	.	K	Q	M	E	L	L	E	N	K	A	I	H	D
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		S	I	F	Q	K	P	K	S	F	T	G	N	F	V	I	D	E	N	I	L	K	E
Template Known Secondary structure					T	S		T	T			S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions