Job Description Q9BUP3 Confidence 99.81% Date Sat Jun 16 10:42:12 BST 2012 Rank 50 Aligned Residues 201 % Identity 15% Template c3iusB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the structure of a functionally unknown conserved protein2 from silicibacter pomeroyi dss Resolution 1.66 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K
Query Conservation
Alig confidence										.																	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	L	L	S	F	G	H	.	G	Y	T	A	R	V	L	S	R	A	L	A	P	Q	G	W	.	.	R	I	I	G	T	S	R	N	P	D	Q	X	E	A	I	R	A	S	G	A	E	P	L	L	W	P	G	E	E	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	G	V	T	H	L	L	I
Template Known Secondary structure								T		.												G	G	G	T		.	.							S		G	G	G							T	T	S					T	T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure										.																	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.														.	.	60	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.														.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	F	D	R	Y	S	V	F
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	A	P	D	S	G	G	D	P	V	L	A	A	L	G	D	Q	I	A	A	R	A	A	Q	F	R	W	V	G	Y	L	S	T	T	A	V	Y	G	D	H	D	G	A	W	V	D	E	T	T	P	L	T	P	T	A	A	R	G	R	W	R	V	X	A	E	Q	Q	W	Q	A	V	P	N	L	P	L	H	V	F
Template Known Secondary structure						B	T	T	B														T	G	G	G		S								G	G	G	S				T	T					T	T	S						S															T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.
Query Sequence		R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E	N	.	.	.	.	.	.	.	K	A	I	H	D	L	G	K	A	H	G
Query Conservation																																																																.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.
Template Sequence		R	L	A	G	I	Y	G	P	G	R	G	P	F	.	.	.	.	.	.	.	G	G	I	R	R	I	I	K	P	G	Q	V	F	S	R	I	H	V	E	D	I	A	Q	V	L	A	A	S	X	A	R	P	D	P	G	A	V	Y	N	V	C	D	D	E	P	V	P	P	Q	D	V	I	A	Y	A	A	E	L	Q	G
Template Known Secondary structure								B	T	T	B	S			.	.	.	.	.	.	.									T	T			B																		S			T	T								S			B													T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		239	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	L	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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