Job Description Q9BUP3 Confidence 99.85% Date Sat Jun 16 10:42:12 BST 2012 Rank 26 Aligned Residues 186 % Identity 18% Template c3dqpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase ylbe; PDBTitle: crystal structure of the oxidoreductase ylbe from2 lactococcus lactis, northeast structural genomics3 consortium target kr121. Resolution 1.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K
Query Conservation
Alig confidence																											.	.																												.
Template Conservation																											.	.																												.
Template Sequence		X	K	I	F	I	V	G	S	T	G	R	V	G	K	S	L	L	K	S	L	S	T	T	D	Y	.	.	Q	I	Y	A	G	A	R	K	V	E	Q	V	P	Q	Y	N	N	V	K	A	V	H	F	D	V	D	W	.	T	P	E	E	X	A	K	Q	L	H	G	X	D	A	I	I	N	V	S	G	S	G	G	K	S
Template Known Secondary structure								S	T	T	S											T	T	S	S		.	.							S	S	G	G	G	S				T	T								T	T	S	.							T	T	T	T	T		S									T	T	S	S
Template Predicted Secondary structure																											.	.																												.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	S	.	.	.	.	.	.	.	.	.	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	F	D	R	Y	S	V	F	R	P	G	V
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		L	L	K	V	D	.	.	.	.	.	L	Y	G	A	V	K	L	X	Q	A	A	E	K	A	E	V	K	R	F	I	L	L	S	T	I	F	S	L	Q	P	E	K	W	I	G	A	G	F	D	A	L	K	D	Y	Y	I	A	K	H	F	A	D	L	Y	L	T	K	E	T	N	L	D	Y	T	I	I	Q	P	G	A
Template Known Secondary structure							.	.	.	.	.														T	T										T	T	T	T		G	G	G			S						T																	S												S
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		78	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	E	E	A	T	G	.	.	.	.	.	.	.	.	.	.	.	.	L	I	D	I	N	D	E	V	S	A	S	N	T	I	G	D	V	A	D	T	I	K	E	L	V	X	T	D	H	S	I	G	K	V	I
Template Known Secondary structure					S				S	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S																			T		G	G	G	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160													.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions