Job Description Q9BUP3 Confidence 98.94% Date Sat Jun 16 10:42:12 BST 2012 Rank 245 Aligned Residues 197 % Identity 15% Template c3afnC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:carbonyl reductase; PDBTitle: crystal structure of aldose reductase a1-r complexed with nadp Resolution 1.63 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																										.	.	.	.	.																													.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.																													.	.	.	.	.	.	.
Query Sequence		R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	.	.	.	.	.	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.																													.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	K	G	K	R	V	L	I	T	G	S	S	Q	G	I	G	L	A	T	A	R	L	F	A	R	A	G	A	K	V	G	L	H	G	R	K	A	P	A	N	I	D	E	T	I	A	S	M	R	A	D	G	G	D	A	A	F	F	A	A	D	L	A	T	S	E	A	C	Q	Q	L	V	D	E	F	V	A	K	F
Template Known Secondary structure		G	G	T	T						T	T		S	S													T	T								S	S			T	T											T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	.	.	.	G	A	D	K	S	S	N	F	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		G	G	I	D	V	L	I	N	N	A	G	G	L	V	G	R	K	P	L	P	E	I	D	D	T	F	Y	D	A	V	M	D	A	N	I	R	S	V	V	M	T	T	K	F	A	L	P	H	L	A	A	A	A	K	A	S	G	Q	T	S	A	V	I	S	T	G	S	I	A	G	H	T	G	G	G	P	G	A	G	L
Template Known Secondary structure		S	S		S															G	G	G														T																						T	S										T								T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		Y	L	Q	V	K	G	E	V	E	A	K	V	E	.	.	.	.	.	.	E	L	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																							.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		Y	G	A	A	K	A	F	L	H	N	V	H	K	N	W	V	D	F	H	T	K	D	G	V	R	F	N	I	V	S	P	G	T	V	D	T	A	F	H	A	D	K	T	Q	D	V	R	D	R	I	S	N	G	I	P	M	G	.	.	.	.	.	R	F	G	T	A	E	E	M	A	P	A	F	L	F	F	A	S	H
Template Known Secondary structure																					G	G	G	T										S	B	S	S	G	G	G	T	T											T	T	S	T	T		.	.	.	.	.	S		B		G	G	G	T
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions