Job Description Q9BUP3 Confidence 99.80% Date Sat Jun 16 10:42:12 BST 2012 Rank 54 Aligned Residues 181 % Identity 22% Template c2ydyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methionine adenosyltransferase 2 subunit beta; PDBTitle: crystal structure of human s-adenosylmethionine synthetase2 2, beta subunit in orthorhombic crystal form Resolution 2.25 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Sequence		N	R	R	V	L	V	T	G	A	T	G	L	L	G	R	A	V	H	K	E	F	Q	Q	N	N	W	H	A	V	G	C	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	I	I	H	D	F	Q	P	H	V	I	V	H	C	A	.	.	.	.	.
Template Known Secondary structure									T	T	T	S												T	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S							.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																											.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	F	D	R	Y	S	V	F
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	S	G	N	L	A	K	E	A	A	A	V	G	A	F	L	I	Y	I	S	S	D	Y	V	F	D	G	T	N	P	P	Y	R	E	E	D	I	P	A	P	L	N	L	Y	G	K	T	K	L	D	G	E	K	A	V	L	E	N	N	.	L	G	A	A	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.															T									G	G	G	S		S	S	S		S	B		T	T	S						S																		.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Template SS confidence
														114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180
		166	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.								.
Predicted Secondary structure														.	.	.	.	.	.																																							.	.	.	.													.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																																							.	.	.	.													.	.	.	.	.	.	.
Query Sequence		R	P	G	V	L	L	C	D	R	Q	E	S	.	.	.	.	.	.	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	.	.	.	.	R	P	R	D	K	Q	M	E	L	L	E	N	.	.	.	.	.	.	.	K
Query Conservation														.	.	.	.	.	.																																							.	.	.	.													.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																																							.	.	.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	P	I	L	Y	G	E	V	E	K	L	E	E	S	A	V	T	V	X	F	D	K	V	Q	F	S	N	K	S	A	N	X	D	H	W	Q	Q	R	F	P	T	H	V	K	D	V	A	T	V	C	R	Q	L	A	E	K	R	X	L	D	P	S	I	K	G	T	F	H	W	S	G	N	E	Q	X	T	K	Y	E
Template Known Secondary structure					S				S		S	S	G	G	G	S	T	T	G	G	G								S	S							S	S	B	B																					T		T	T										S			B
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		229	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	H	D	L	G	K	A	H	G	S	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	C	A	I	A	D	A	F	N	L	P	S	S
Template Known Secondary structure										T	T				T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions