Job Description Q9BUP3 Confidence 99.83% Date Sat Jun 16 10:42:12 BST 2012 Rank 35 Aligned Residues 224 % Identity 13% Template c2q1wC_ PDB info PDB header:sugar binding protein Chain: C: PDB Molecule:putative nucleotide sugar epimerase/ dehydratase; PDBTitle: crystal structure of the bordetella bronchiseptica enzyme wbmh in2 complex with nad+ Resolution 2.19 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	.	.	H	D	V	G	F	C	C	L	G	T	T	R
Query Conservation																																																																				.	.
Alig confidence																																																																				.	.
Template Conservation
Template Sequence		K	K	V	F	I	T	G	I	C	G	Q	I	G	S	H	I	A	E	L	L	L	E	R	G	D	K	V	V	G	I	D	N	F	A	T	G	R	R	E	H	L	K	D	H	P	N	L	T	F	V	E	G	S	I	A	D	H	A	L	V	N	Q	L	I	G	D	L	Q	P	D	A	V	V	H	T	A	A	S	Y	K
Template Known Secondary structure								T	T	T	S													T	T										S	S			G	G	G	S				T	T								T	T															S										S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.															.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	F	D	R	Y
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	D	D	W	Y	N	D	T	L	T	N	C	V	G	G	S	N	V	V	Q	A	A	K	K	N	N	V	G	R	F	V	Y	F	Q	T	A	L	C	Y	G	V	K	P	I	Q	Q	P	V	R	L	D	H	P	R	N	P	A	N	S	S	Y	A	I	S	K	S	A	N	E	D	Y	L	E	Y	S	G	L	D	F
Template Known Secondary structure			T	T										T													T	T		S								G	G	G	G		S	S		S	S	S	S	B		T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.
Predicted Secondary structure																									.																																											.	.	.	.	.	.
Query SS confidence																									.																																											.	.	.	.	.	.
Query Sequence		S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	.	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E	N	.	.	.	.	.	.	K	A	I	H	D	L	G	K
Query Conservation																									.																																											.	.	.	.	.	.
Alig confidence																									.																																											.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	F	R	L	A	N	V	V	G	P	R	N	S	G	P	L	P	I	F	F	Q	R	L	S	E	G	K	K	C	F	V	T	K	A	R	R	D	F	V	F	V	K	D	L	A	R	A	T	V	R	A	V	D	G	V	G	H	G	A	Y	H	F	S	S	G	T	D	V	A	I	K	E	L	Y	D	A	V	V	E
Template Known Secondary structure							S				S	T	T														T	T							S																				T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		236	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	G	S	L	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	A	L	P	S	Y
Template Known Secondary structure				T		S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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