Job Description Q9BUP3 Confidence 99.70% Date Sat Jun 16 10:42:12 BST 2012 Rank 85 Aligned Residues 219 % Identity 17% Template c2p5uC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of thermus thermophilus hb8 udp-glucose 4-2 epimerase complex with nad Resolution 2.37 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	.	.	H	D	V	G	F	C	C	L	G	T	T	R	G
Query Conservation																																																																			.	.
Alig confidence																										.	.																																								.	.
Template Conservation																										.	.
Template Sequence		R	V	L	V	T	G	G	A	G	F	I	G	S	H	I	V	E	D	L	L	A	R	G	L	.	.	E	V	A	V	L	D	N	L	A	T	G	K	R	E	N	V	P	K	G	V	P	F	F	R	V	D	L	R	D	K	E	G	V	E	R	A	F	R	E	F	R	P	T	H	V	S	H	Q	A	A	Q	A	S	V
Template Known Secondary structure						T	T	T	T	S													T	T		.	.									S	S			G	G	G	S		T	T	S							T	T															S							S
Template Predicted Secondary structure																										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	E	L	K	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		K	V	S	V	E	D	P	V	L	D	F	E	V	N	L	L	G	G	L	N	L	L	E	A	C	R	Q	Y	G	V	E	K	L	V	F	A	S	T	G	G	A	I	Y	G	E	V	P	E	G	E	R	A	E	E	T	W	P	P	R	P	K	S	P	Y	A	A	S	K	A	A	F	E	H	Y	L	S	V	Y	G	Q
Template Known Secondary structure																T													T	T		S												T					T	T			B		T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
				159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.															.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M
Query Conservation		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation																																																																													.	.
Template Sequence		S	Y	G	L	K	W	V	S	L	R	Y	G	N	V	Y	G	P	R	Q	D	P	H	G	E	A	G	V	V	A	I	F	A	E	R	V	L	K	G	L	P	V	T	L	Y	A	R	K	T	P	G	D	E	G	C	V	R	D	Y	V	Y	V	G	D	V	A	E	A	H	A	L	A	L	F	S	L	.	.	E	G	I
Template Known Secondary structure																		T	T			T	T	S	G	G	G											T	T								S	S	S	T	T	S																									.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.
		223	.	.	.	.								.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure							.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.
Query Sequence		E	L	L	E	N	.	.	.	.	.	.	.	K	A	I	H	D	L	G	K	A	H	G	S	L	K	P
Query Conservation							.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	V	G	T	G	E	G	H	T	T	R	E	V	L	M	A	V	A	E	A	A	G	K	A	P	E
Template Known Secondary structure					S		S																	T	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions