Job Description Q9BUP3 Confidence 99.50% Date Sat Jun 16 10:42:12 BST 2012 Rank 91 Aligned Residues 205 % Identity 15% Template c2jahB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:clavulanic acid dehydrogenase; PDBTitle: biochemical and structural analysis of the clavulanic acid2 dehydeogenase (cad) from streptomyces clavuligerus Resolution 1.80 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.																								.	.	.
Query SS confidence																																																		.	.	.	.	.	.																								.	.	.
Query Sequence		R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	.	.	.	.	.	.	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	.	.	.
Query Conservation																																																		.	.	.	.	.	.																								.	.	.
Alig confidence																															.	.																		.	.	.	.	.	.																								.	.	.
Template Conservation																															.	.
Template Sequence		A	L	Q	G	K	V	A	L	I	T	G	A	S	S	G	I	G	E	A	T	A	R	A	L	A	A	E	G	A	.	.	A	V	A	I	A	A	R	R	V	E	K	L	R	A	L	G	D	E	L	T	A	A	G	A	K	V	H	V	L	E	L	D	V	A	D	R	Q	G	V	D	A	A	V	A	S	T	V	E	A
Template Known Secondary structure		T	T	T	T							S	T	T	S													T	T		.	.							S															T	T										T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
						86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.													.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E
Query Conservation		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	G	L	D	I	L	V	N	N	A	G	I	X	L	L	G	P	V	E	D	A	D	T	T	D	W	T	R	X	I	D	T	N	L	L	G	L	X	Y	X	T	R	A	A	L	P	H	L	L	R	S	K	G	T	V	V	Q	X	S	S	I	A	G	R	V	N	V	R	N	A	A	V	Y	Q	A	T	K	F	G
Template Known Secondary structure			S			S														S	T	T														T																		T									G	G	G	T				T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		150	.	.	.	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		V	E	A	K	V	E	E	L	K	.	.	.	.	.	.	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																																					.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		V	N	A	F	S	E	T	L	R	Q	E	V	T	E	R	G	V	R	V	V	V	I	E	P	G	T	T	D	T	E	L	R	G	H	I	T	H	T	A	T	K	E	X	Y	E	Q	R	I	S	Q	I	.	.	.	.	R	K	L	Q	A	Q	D	I	A	E	A	V	R	Y	A	V	T	A	P	H	H	A	T	V	H
Template Known Secondary structure														G	G	G	T										S	B		S	S	G	G	G	G														T	S	S	S	.	.	.	.			B															S		T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		224	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions