Job Description Q9BUP3 Confidence 98.99% Date Sat Jun 16 10:42:12 BST 2012 Rank 233 Aligned Residues 189 % Identity 14% Template c2et6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:(3r)-hydroxyacyl-coa dehydrogenase; PDBTitle: (3r)-hydroxyacyl-coa dehydrogenase domain of candida tropicalis2 peroxisomal multifunctional enzyme type 2 Resolution 2.22 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.
Query Sequence		F	R	M	Q	N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	.	.	.	.	.	.	.	Q	G	H	D
Query Conservation																																																																							.	.	.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	L	K	D	K	V	V	L	I	T	G	A	G	A	G	L	G	K	E	Y	A	K	W	F	A	K	Y	G	A	K	V	V	V	N	D	F	K	D	A	T	K	T	V	D	E	I	K	A	A	G	G	E	A	W	P	D	Q	H	D	V	A	K	D	S	E	A	I	I	K	N	V	I	D	K	Y	G	T	I	D
Template Known Secondary structure					T	T						S	S		S	S													T	T								S	S												T	T																										S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.												110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																										.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.																										.	.
Query Sequence		V	G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	G	F	V	R	V	D	R	.	.	.	.	.	.	.	.	.	.	.	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	.	.	A	D	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.																										.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		I	L	V	N	N	A	G	I	L	R	D	R	S	F	A	K	M	S	K	Q	E	W	D	S	V	Q	Q	V	H	L	I	G	T	F	N	L	S	R	L	A	W	P	Y	F	V	E	K	Q	F	G	R	I	I	N	I	T	S	T	S	G	I	Y	G	N	F	G	Q	A	N	Y	S	S	S	K	A	G	I	L	G	L
Template Known Secondary structure													B		T	T	T														T																	T	T														S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		154	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		V	E	E	L	K	.	.	.	.	.	.	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	T	M	A	I	E	G	A	K	N	N	I	K	V	N	I	V	A	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	T	A	M	K	N	L	Y	H	A	D	Q	V	A	P	L	L	V	Y	L	G	T	D	D	V	P	V	T	G	E	T	F	E
Template Known Secondary structure										G	G	G	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		G	G	G	T							T	T	S	T	T					S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.																									.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions