Job Description Q9BUP3 Confidence 99.88% Date Sat Jun 16 10:42:12 BST 2012 Rank 15 Aligned Residues 223 % Identity 13% Template c2b69A_ PDB info PDB header:lyase Chain: A: PDB Molecule:udp-glucuronate decarboxylase 1; PDBTitle: crystal structure of human udp-glucoronic acid decarboxylase Resolution 1.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	F	S	K	V	T	L	I	G	R	R	K	L	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V	G	F	C	C	L	G	T	T	R	G
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		R	K	R	I	L	I	T	G	G	A	G	F	V	G	S	H	L	T	D	K	L	X	X	D	G	H	.	.	E	V	T	V	V	D	N	F	F	T	G	R	K	R	N	V	E	H	W	I	G	H	E	N	F	E	L	I	N	H	D	V	V	E	P	L	Y	I	E	V	D	Q	I	Y	H	L	A	S	P	A	S	P
Template Known Secondary structure									T	T	T	S													T	T		.	.									S	S			G	G	G	T	G	G	G	T	T		T	T								T	T	S							S							S			S
Template Predicted Secondary structure																												.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		98	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure				.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence				.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		K	A	.	.	G	A	E	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	S	N	F	L	Y	L	Q	V	K	G	E	V	E	A	K	V	E	.	.
Query Conservation				.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence				.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		P	N	Y	X	Y	N	P	I	K	T	L	K	T	N	T	I	G	T	L	N	X	L	G	L	A	K	R	V	G	A	R	L	L	L	A	S	T	S	E	V	Y	G	D	P	E	V	H	P	Q	S	E	D	Y	W	G	H	V	N	P	I	G	P	R	A	C	Y	D	E	G	K	R	V	A	E	T	X	C	Y	A	Y
Template Known Secondary structure					T	T																								T									G	G	G	G	B	S		S	S	S	S	B		T	T				B			S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.																							.	.	.	.	.	.	.	.
Query SS confidence		.																							.	.	.	.	.	.	.	.
Query Sequence		.	E	L	K	F	D	R	Y	S	V	F	R	P	G	V	L	L	C	D	R	Q	E	S	.	.	.	.	.	.	.	.	R	P	G	E	W	L	V	R	K	F	F	G	S	L	P	D	S	W	A	S	G	H	S	V	P	V	V	T	V	V	R	A	M	L	N	N	V	V	R	P	R	D	K	Q	M	E	L	L	E
Query Conservation		.																							.	.	.	.	.	.	.	.
Alig confidence		.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	K	Q	E	G	V	E	V	R	V	A	R	I	F	N	T	F	G	P	R	X	H	X	N	D	G	R	V	V	S	N	F	I	L	Q	A	L	Q	G	E	P	L	T	V	Y	G	S	G	S	Q	T	R	A	F	Q	Y	V	S	D	L	V	N	G	L	V	A	L	X	N	S	N	V	S	S	P	V	N	L	G	N
Template Known Secondary structure																				T	T			T	T															T							S	S	S																					T	S	S			S					S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		227							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure			.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.
Query Sequence		N	.	.	.	.	.	.	K	A	I	H	D	L	G	K	A	H	G	S	L	K	P
Query Conservation			.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	E	H	T	I	L	E	F	A	Q	L	I	K	N	L	V	G	S	G	S	E
Template Known Secondary structure																			T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions