Job Description Q9BUP3 Confidence 97.19% Date Sat Jun 16 10:42:12 BST 2012
Rank 352 Aligned Residues 113
% Identity 17% Template c1mldA_
PDB info
PDB header: oxidoreductase(nad(a)-choh(d))Chain: A: PDB Molecule: malate dehydrogenase;
PDBTitle: refined structure of mitochondrial malate dehydrogenase2 from porcine heart and the consensus structure for3 dicarboxylic acid oxidoreductases
Resolution 1.83 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . .
. . . . . 80 . . . . . . . . . 90 . . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
S V F I L G A S G E T G R V L L K E I L E Q G L F S K V T L I G R R K L T F D E E A Y K N V N Q E V V D F E K .
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L D D Y A S A F Q G H D V G F C C L G T T R G
Query Conservation  
                                                                              . .                                          
Alig confidence  
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Template Conservation  
                                                                                                 
Template Sequence  
K V A V L G A S G G I G Q P L S L L L K N S P L V S R L T L Y D I A H T P G V A A D L S H I E T R A T V K G Y L G P E Q L P D C L K G C D V V V I P A G V P R K
Template Known Secondary structure  
T T T S T T T T T S S S S T T S S S S S G G G T T S S
Template Predicted Secondary structure  
Template SS confidence  
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
 
   
98 . 100 . . . . .
. . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
K A G A E G F V .
R V D R D Y V L K S A E L A K A G G C K H F N L L S S
Query Conservation  
                .                                                    
Alig confidence  
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Template Conservation  
                                         
Template Sequence  
P G M T R D D L F N T N A T I V A T L T A A C A Q H C P D A M I C I I S
Template Known Secondary structure  
T T G G G G T T S S
Template Predicted Secondary structure  
Template SS confidence  
   
82 . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]