Job Description Q9BUP3 Confidence 96.07% Date Sat Jun 16 10:42:12 BST 2012 Rank 486 Aligned Residues 116 % Identity 18% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		S	V	F	I	L	G	A	S	G	E	T	G	R	V	L	L	K	E	I	L	E	Q	G	L	.	.	.	.	.	.	.	F	S	K	V	T	L	I	G	R	R	K	L	.	.	.	.	.	T	F	D	E	E	A	Y	K	N	V	N	Q	E	V	V	D	F	E	K	L	D	D	Y	A	S	A	F	Q	G	H	D	V
Query Conservation																										.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	V	T	G	A	A	G	Q	I	C	Y	S	L	L	F	R	I	A	N	G	D	M	L	G	K	D	Q	P	V	I	L	Q	L	L	E	I	P	N	E	K	A	Q	K	A	L	Q	G	V	M	M	E	I	D	D	C	A	F	P	L	L	A	G	M	T	A	H	A	D	P	M	T	A	F	K	D	A	D	V
Template Known Secondary structure							S	T	T	S												T	T	T	T	T		T	T											S																	T	T	T		T	T								S						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		G	F	C	C	L	G	T	T	R	G	K	A	G	A	E	.	G	F	V	R	V	D	R	D	Y	V	L	K	S	A	E	L	A	K	A	G	G	C	K	H	F	N	L	L	S	S	K	G	A
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		A	L	L	V	G	A	R	P	R	G	P	G	M	E	R	K	D	L	L	E	A	N	A	Q	I	F	T	V	Q	G	K	A	I	D	A	V	A	S	R	N	I	K	V	L	V	V	G	N	P
Template Known Secondary structure												T	T																									S		T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions