Job Description P51813 Confidence 100.00% Date Fri May 25 10:09:19 BST 2012 Rank 244 Aligned Residues 235 % Identity 29% Template c4aaaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 2; PDBTitle: crystal structure of the human cdkl2 kinase domain Resolution 1.53 Å

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		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure																									.																			.	.	.
Query SS confidence																									.																			.	.	.
Query Sequence		E	E	I	T	L	L	K	E	L	G	S	G	Q	F	G	V	V	Q	L	G	K	W	K	.	G	Q	Y	D	V	A	V	K	M	I	K	E	G	S	M	S	E	D	.	.	.	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	S	K	E	Y	P	I	Y	I	V	T	E
Query Conservation																									.																			.	.	.
Alig confidence																									.																			.	.	.
Template Conservation
Template Sequence		E	K	Y	E	N	L	G	L	V	G	E	G	S	Y	G	M	V	M	K	C	R	N	K	D	T	G	R	I	V	A	I	K	K	F	L	E	S	D	D	D	K	M	V	K	K	I	A	M	R	E	I	K	L	L	K	Q	L	R	H	E	N	L	V	N	L	L	E	V	C	K	K	K	K	R	W	Y	L	V	F	E
Template Known Secondary structure		G	G							G	G	G	G	T	T	S	S							T	T	T											S		S	S																					T	T	B										T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	S	N	G	C	L	L	N	Y	L	R	S	H	G	K	G	L	E	P	S	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	D	R	D	L	C	V	K	V	S	D	F	G	M	T	R	Y	V	L	D	D	Q	Y	V	S	S	V
Query Conservation
Alig confidence																.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	H	T	I	L	D	D	L	E	L	F	P	.	N	G	L	D	Y	Q	V	V	Q	K	Y	L	F	Q	I	I	N	G	I	G	F	C	H	S	H	N	I	I	H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	V	V	K	L	C	D	F	G	F	A	E	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S										S	T	.	T																								T	T								G	G	G					T	T	S								T	T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.		.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	.	F	K	Y	S	S	K	S	D	V	W	A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	S	Q	V	V	L	K	V	S	Q	G	H	R	L	Y	R	P	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.																						.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																					.
Template Sequence		.	.	V	A	T	R	W	Y	R	A	P	E	L	L	V	G	D	V	K	Y	G	K	A	V	D	V	W	A	I	G	C	L	V	T	E	M	F	M	.	G	E	P	L	F	P	G	D	S	D	I	D	Q	L	Y	H	I	M	M	C	L	G	N	L	I	P	R	H	Q	E	L	F	N	K	N	P	V	F	A	G	V
Template Known Secondary structure		.	.					T	T							T	T		T	T			T																	.	S	S		S				S	S														S													G	G	G	T	T
Template Predicted Secondary structure		.	.																																					.
Template SS confidence
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
																			637	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	P	E	I	K	E	R	E	P	L	E	R	R	Y	P	K	L	S	E	V	V	I	D	L	A	K	K	C	L	H	I	D	P	D	K	R	P	F	C	A	E	L	L	H
Template Known Secondary structure							S	S								S	T	T	S												T		S	S	G	G	G	S			G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions