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Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank30Aligned Residues246
% Identity22%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   415....420.........430.........440.........450...... ...460.........470.........480.........490.
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Query Sequence  EEITLLKELGSGQFGVVQLGKWKGQYDVAVKMIKEGSMSEDE. . . FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY
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Template Sequence  EEYQLFEELGKGSVVRRCVKVL. AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL
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TT.TTS
S


BTTB


SS

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   11........20.........30.. .......40.........50.........60.........70.........80.........
 
   492.......500.........510.........520.........530.........540......... 550.........560........
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Query Sequence  ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLC. . . VKVSDFGMTRYVLDDQYVS
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Template Sequence  VTGGELFEDIVAR. EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW
Template Known Secondary structure 
B

B
.S


TT
B



SSTTSBSSTT




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B


TT

B
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   92.......100.... .....110.........120.........130.........140.........150.........160.........170
 
   569570.........580.........590.........600.........610.........620.........630 .........640.....
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Query Sequence  SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKVSQGHR. . . LYRPHLASDTIYQIM
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Template Sequence  FG. FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLI
Template Known Secondary structure 

.S
S
GGG

TT

B
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SST




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   171. .......180.........190.........200........ .210.........220.........230.........240........
 
   646...650.........660....
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Query Sequence  YSCWHELPEKRPTFQQLLS
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Template Sequence  NKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   249250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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