Job Description P51813 Confidence 100.00% Date Fri May 25 10:09:19 BST 2012 Rank 133 Aligned Residues 250 % Identity 15% Template c3q60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp Resolution 1.72 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.					.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Predicted Secondary structure																						.																					.	.	.	.																											.	.	.	.	.	.	.	.	.
Query SS confidence																						.																					.	.	.	.																											.	.	.	.	.	.	.	.	.
Query Sequence		I	T	L	L	K	E	L	G	S	G	Q	F	G	V	V	Q	L	G	K	W	.	K	G	Q	Y	D	V	A	V	K	M	I	K	E	G	S	M	S	E	D	E	.	.	.	.	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	S	K	E	.	.	.	.	.	.	.	.	.
Query Conservation																						.																					.	.	.	.																											.	.	.	.	.	.	.	.	.
Alig confidence																						.																					.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	L	V	E	P	L	R	V	G	D	R	S	V	V	F	L	V	R	D	V	E	R	L	E	D	F	A	L	K	V	F	T	M	G	A	E	N	S	R	S	E	L	E	R	L	H	E	A	T	F	A	A	A	R	L	L	G	R	L	L	L	P	S	D	A	V	A	V	Q	S	Q	P	P	F	A	Q	L	S	P
Template Known Secondary structure												S	S									T	T	T	T												S	T	T																						B										T	T	S		S	S	S	B		S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
						483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.							.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure		.	.	.	.																						.	.	.	.	.	.
Query SS confidence		.	.	.	.																						.	.	.	.	.	.
Query Sequence		.	.	.	.	Y	P	I	Y	I	V	T	E	Y	I	S	N	G	C	L	L	N	Y	L	R	S	.	.	.	.	.	.	H	G	K	G	L	E	P	S	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	D	R	D	L	C	V	K	V
Query Conservation		.	.	.	.																						.	.	.	.	.	.
Alig confidence		.	.	.	.											.											.	.	.	.	.	.
Template Conservation																.
Template Sequence		G	Y	A	V	A	N	Y	L	L	L	M	P	A	A	.	S	V	D	L	E	L	L	F	S	T	L	D	F	V	Y	V	F	R	G	D	E	G	I	L	A	L	H	I	L	T	A	Q	L	I	R	L	A	A	N	L	Q	S	K	G	L	V	H	G	H	F	T	P	D	N	L	F	I	M	P	D	G	R	L	M	L
Template Known Secondary structure																.	S													S																													T	T				T	T		S	G	G	G					T	T	S
Template Predicted Secondary structure																.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.			.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		S	D	F	G	M	T	R	Y	V	L	D	D	Q	Y	V	S	S	V	G	T	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	.	.	Y	S	S	K	S	D	V	W	A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	S	Q	V	V	L	K	V	S	Q	G	H	R
Query Conservation																																						.	.
Alig confidence																							.	.	.	.												.	.																				.
Template Conservation																							.	.	.	.																																	.
Template Sequence		G	D	V	S	A	L	W	K	V	G	T	R	G	P	A	S	S	V	P	V	T	.	.	.	.	Y	A	P	R	E	F	L	N	A	S	T	A	T	F	T	H	A	L	N	A	W	Q	L	G	L	S	I	Y	R	V	W	C	.	L	F	L	P	F	G	L	V	T	P	G	I	K	G	S	W	K	R	P	S	L	R
Template Known Secondary structure				G	G	G				T	T					G	G	G	S		G	G	.	.	.	.	G							T		S																							.	S	S		S	T	T	B			T	T		T	T				B			T	T
Template Predicted Secondary structure																							.	.	.	.																																	.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.					.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		631	.	.	.	.									.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.			.	.	.	.	.	670	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																														.	.
Query SS confidence							.	.	.	.	.	.	.	.																														.	.
Query Sequence		L	Y	R	P	H	.	.	.	.	.	.	.	.	L	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S	.	.	S	I	E	P	L	R	E	K
Query Conservation							.	.	.	.	.	.	.	.																														.	.
Alig confidence							.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		V	P	G	T	D	S	L	A	F	G	S	C	T	P	L	P	D	F	V	K	T	L	I	G	R	F	L	N	F	D	R	R	R	R	L	L	P	L	E	A	M	E	T	P	E	F	L	Q	L	Q	N	E
Template Known Secondary structure		S					S				T	T	S	S														T		S	S	T	T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions