Job Description P51813 Confidence 97.88% Date Fri May 25 10:09:19 BST 2012 Rank 487 Aligned Residues 98 % Identity 16% Template c3mpxA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:fyve, rhogef and ph domain-containing protein 5; PDBTitle: crystal structure of the dh and ph-1 domains of human fgd5 Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	T	K	S	I	L	E	E	L	L	L	K	R	S	Q	Q	K	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	K	T	N	L	S	Y	Y	E	Y	D	K	M	K	R	G	S	R	K	G	S	I	E	I	K	K	I	R	C	V	E	K	V	N	L	E	E	Q	T	P	V	E	R	Q	Y	P	F
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	G	D	L	L	Q	P	G	R	E	F	L	K	E	G	T	L	X	K	V	T	G	K	N	R	R	P	R	H	L	F	L	X	N	D	V	L	L	Y	T	Y	P	Q	K	D	G	K	Y	R	L	K	N	T	L	A	V	S	R	P	.	.	.	.	.	.	.	.	.	.	.	V	X	E	K	V	P	Y	A	L
Template Known Secondary structure		T							T	T														T	T											S	S									T	T	S														.	.	.	.	.	.	.	.	.	.	.			T	T	S		S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1103	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.												.	.	.	.	.	.	.	1170	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	Y	K	D	G	L	L	Y	V	Y	A	S	N	E	E	S	R	S	Q	W	L	K	A	L	Q	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	E	T	S	E	S	C	L	X	L	S	A	S	S	C	A	E	R	D	E	W	Y	G	C	L	S	R	A
Template Known Secondary structure						S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		1177	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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