Job Description P51813 Confidence 99.43% Date Fri May 25 10:09:19 BST 2012 Rank 352 Aligned Residues 123 % Identity 16% Template c3ml4D_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:protein dok-7; PDBTitle: crystal structure of a complex between dok7 ph-ptb and the musk2 juxtamembrane region Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.									.	.	.
Query SS confidence																																			.	.	.	.	.	.									.	.	.
Query Sequence		S	I	L	E	E	L	L	L	K	R	S	Q	Q	K	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	K	T	N	.	.	.	.	.	.	L	S	Y	Y	E	Y	D	K	.	.	.	M	K	R	G	S	R	K	G	S	I	E	I	K	K	I	R	C	V	E	K	V	N	L	E	E	Q	T	P	V	E
Query Conservation																																			.	.	.	.	.	.									.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.															.	.	.	.	.	.									.	.	.																						.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Template Sequence		A	L	V	E	G	Q	V	K	L	R	.	.	.	.	.	.	.	.	.	D	K	W	K	S	R	W	L	V	L	R	K	P	S	P	V	A	D	C	L	L	X	L	V	Y	K	D	K	C	E	R	S	K	G	L	R	E	R	S	S	L	T	L	E	D	I	C	G	L	E	P	A	.	.	.	.	L	P	Y	E	G
Template Known Secondary structure			S									.	.	.	.	.	.	.	.	.													S	S	S	S	S	S								S	S						T	T				S							S								.	.	.	.				T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		R	Q	Y	P	F	Q	I	V	Y	K	D	G	L	L	Y	V	Y	A	S	N	E	E	S	R	S	Q	W	L	K	A	L	Q	K	E	I	R	G	N	P	H	L	L	V	K	Y	H	S	G	.	F	F	V	D	G	K	F	L	C	C	Q	Q	S	C	K	A	A
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		L	A	H	T	L	A	I	I	C	L	S	Q	A	V	X	L	G	F	D	S	H	E	A	X	C	A	W	D	T	R	I	R	Y	A	L	G	E	V	H	R	F	H	V	T	V	A	P	G	T	K	L	E	S	G	P	A	T	L	H	L	C	N	D	I	L	V
Template Known Secondary structure											S	S								S	S															T	S	S										S	S	S	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions