Job Description P51813 Confidence 98.63% Date Fri May 25 10:09:19 BST 2012 Rank 434 Aligned Residues 147 % Identity 13% Template c3ky9B_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: autoinhibited vav1 Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	I	L	E	E	L	L	L	K	R	S	Q	Q	K	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	K	T	N	L	S	Y	Y	E	Y	D	K	M	K	R	G	S	R	K	G	S	I	E	I	K	K	I	R	C	V	E	K	V	N	L	E	E	Q	T	P	V	E	R	Q	Y	P	F	Q	I	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.																			.																		.
Template Conservation																.	.	.	.	.	.	.	.																			.																		.
Template Sequence		R	P	K	I	D	G	E	L	K	I	T	S	V	E	.	.	.	.	.	.	.	.	R	M	D	R	Y	A	F	L	L	D	K	A	L	L	I	C	K	R	.	R	G	D	S	Y	D	L	K	D	F	V	N	L	H	S	F	Q	.	V	R	D	D	S	S	G	D	R	D	N	K	K	W	S	H	M	F	L	L	I
Template Known Secondary structure														S		.	.	.	.	.	.	.	.										T	T								.		T	T										G	G	G			.						S	S	T	T	T	T		T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																			.																		.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.									.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
		84	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.
Predicted Secondary structure					.	.																										.	.															.																		.	.	.	.	.	.	.
Query SS confidence					.	.																										.	.															.																		.	.	.	.	.	.	.
Query Sequence		Y	K	D	.	.	G	L	L	Y	V	Y	A	S	N	E	E	S	R	S	Q	W	L	K	A	L	Q	K	E	I	R	.	.	G	N	P	H	L	L	V	K	Y	H	S	G	F	F	.	V	D	G	K	F	L	C	C	Q	Q	S	C	K	A	A	P	G	.	.	.	.	.	.	.	C	T	L	W	E	A	Y	A	N
Query Conservation					.	.																										.	.															.																		.	.	.	.	.	.	.
Alig confidence					.	.																										.	.															.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	D	Q	G	A	Q	G	Y	E	L	F	F	K	T	R	E	L	K	K	K	W	M	E	Q	F	E	M	A	I	S	N	I	Y	P	E	N	A	T	A	N	G	H	D	F	Q	M	F	S	F	E	E	T	T	S	C	K	A	C	Q	M	L	L	R	G	T	F	Y	Q	G	Y	R	C	H	R	C	R	A	S	A	H
Template Known Secondary structure			T	T	S	S								S	S																			S		T	T	T	T	G	G	G									S	S			B		T	T	T		S	B			S	S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
		152	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	T	A	V	N	E	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	C	L	G	R	V	P	P
Template Known Secondary structure		S	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		555	.	.	.	.	560	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions