Job Description P51813 Confidence 98.25% Date Fri May 25 10:09:19 BST 2012 Rank 474 Aligned Residues 86 % Identity 19% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																													.	.
Query SS confidence																																		.																													.	.
Query Sequence		D	Y	D	W	F	A	G	N	I	S	R	S	Q	S	E	Q	L	L	R	Q	K	G	K	E	G	A	F	M	V	R	N	S	.	S	Q	V	G	M	Y	T	V	S	L	F	S	K	A	V	N	D	K	K	G	T	V	K	H	Y	H	V	H	.	.	T	N	A	E	N	K	L	Y	L	A	E	N	Y	C	F	D	S
Query Conservation																																		.																													.	.
Alig confidence								.															.											.													.	.	.	.	.												.	.
Template Conservation								.															.																								.	.	.	.	.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	.	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	.	.	.	.	.	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D
Template Known Secondary structure		T		T	T	B		.												T	T	S	.		T	T									S	T	T										.	.	.	.	.		T	T																				S	S	S				S	S
Template Predicted Secondary structure								.															.																								.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	K	L	I	H	Y	H	Q	H	N	S	A	G	M	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	Q	I	I	V	E	Y	L	Q	N	K	I	R	L	L
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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