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Job DescriptionP51813
Confidence99.97%DateFri May 25 10:09:19 BST 2012
Rank276Aligned Residues172
% Identity16%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   420.........430.........440.........450...... ...460.........470.........480.........490
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Query Sequence  LKELGSGQFGVVQLGKWKGQYDVAVKMIKEGSMSEDE. . . . . . . . . FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE
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Template Sequence  VEVNWIGAEADIKRDSY. LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS
Template Known Secondary structure  S






S.TT


TTS
GGGTT




TTTT
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   319320.........330..... ....340.........350.........360.........370.........380.........390.......
 
   491........500.........510.........520.........530.........540.........550.........560.........570
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Query Sequence  YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV
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Template Sequence  YINGKLAKDVIEDN. . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKD. . LYIIDFGLGKISNLDEDKAVD
Template Known Secondary structure 


SGGGTTTT
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S


GGGSSS..


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   415....420........ .430.........440.........450.........460.. .......470.........480...
 
   571........580.........590.........600.........610
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Query Sequence  GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK
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Template Sequence  . . . . . . LIVFKKAVLSTHHEKFDEIWERFLEGYKSVY. DR
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TTT
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   484.....490.........500.........510.... ..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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