Job Description P51813 Confidence 98.38% Date Fri May 25 10:09:19 BST 2012 Rank 462 Aligned Residues 130 % Identity 18% Template c3dxpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (reut_a1007) from ralstonia eutropha jmp134 at 2.32 a resolution Resolution 2.32 Å

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		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.			.	.	.	.	.	.	.	480	.	.	.				.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure																																																							.	.												.	.	.
Query SS confidence																																																							.	.												.	.	.
Query Sequence		L	K	E	L	G	S	G	Q	F	G	V	V	Q	L	G	K	W	K	G	Q	Y	D	V	A	V	K	M	I	K	E	G	S	M	S	E	D	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	.	.	V	K	F	Y	G	V	C	S	K	E	Y	.	.	.	P	I	Y	I	V	T	E	Y	I	S	N
Query Conservation																																																							.	.												.	.	.
Alig confidence							.												.														.	.	.	.	.	.																	.	.												.	.	.
Template Conservation							.												.														.	.	.	.	.	.
Template Sequence		V	E	Q	F	K	.	G	Q	S	N	P	T	F	K	L	V	T	.	P	G	Q	T	Y	V	X	R	A	K	P	G	A	.	.	.	.	.	.	I	E	R	E	Y	R	V	X	D	A	L	A	G	T	D	V	P	V	A	K	X	Y	A	L	C	E	D	E	S	V	I	G	R	A	F	Y	I	X	E	F	V	S	G
Template Known Secondary structure							.				S								.	S	S												.	.	.	.	.	.												T	T	S	S	S												T	T	T	T	S	S
Template Predicted Secondary structure							.												.														.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	L	L	N	Y	L	R	S	H	G	K	G	L	E	P	S	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.
Template Sequence		R	V	L	W	D	.	.	.	Q	S	L	P	G	X	S	P	A	E	R	T	A	I	Y	D	E	X	N	R	V	I	A	A	X	H	T	V	D	Y	Q	A	I	G	L	G	D	Y	G	K	P	G	N	Y	F	Q	R	Q	I	E	R	W	T	K	Q	Y	K	L	S	E	T	E	S	I	P	A	X	D	S	L	X	D
Template Known Secondary structure		B					.	.	.	T	T		T	T																							S		T	T	T	T	T		T	T	S	S			S																				S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		125	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
																			534	.	.	.	.	.	540	.	.	.	.	.	.	.	.			.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	D	L	A	A	R	N	C	L	V	D	R	D	L	.	.	C	V	K	V	S	D	F	G	M	T	R	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		W	L	P	Q	H	I	P	Q	E	D	A	D	L	T	S	I	V	H	G	D	Y	R	L	D	N	L	X	F	H	P	T	E	P	R	V	L	A	V	L	D	W	E	L	S	T	L
Template Known Secondary structure			G	G	G				S	T	T	S	S							S	S		S	G	G	G					S	S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions