Return to main results Retrieve Phyre Job Id

Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank33Aligned Residues257
% Identity39%Templatec3dpkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   406...410.........420.........430.........440 .........450..... ....460....... ..470.........
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Query Sequence  GNGIWELKREEITLLKELGSGQFGVVQLGKWKGQY. . . DVAVKMIKEGSMSED. . EFFQEAQTMMKL. SHPKLVKFYGVC
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Template Sequence  YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC
Template Known Secondary structure 

GGGB

GGG
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   571........580.........590.........600.........610.........620.........630.........640.........650
 
   480.........490.........500.........510.........520.........530.........540.........550.........
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Query Sequence  SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR
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Template Sequence  THGGPVLVITEYCCYGDLLNFLRRQ. . . LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR
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SSSS


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SGGGGGG


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   654.....660.........670........ .680.........690.........700.........710.........720.........730
 
   560.........570.........580.........590.........600.........610.........620..... ....630........
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Query Sequence  YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKV. SQGHRLYRPHLAS
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Template Sequence  DIMNDSNYIVRLPVK. . . WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP
Template Known Secondary structure 
GGG
TTSB

B
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TTS

SSTT

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   802.......810...... ...820.........830.........840.........850.........860.........870........
 
   639640.........650.........660........
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Query Sequence  DTIYQIMYSCWHELPEKRPTFQQLLSSIEP
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Template Sequence  KNIYSIMQACWALEPTHRPTFQQICSFLQE
Template Known Secondary structure  T
SSGGGS


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   883......890.........900.........910..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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