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Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank172Aligned Residues239
% Identity23%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   411........420.........430.........440.........450..... ....460........ .470.........480.....
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Query Sequence  ELKREEITLLKELGSGQFGVVQLGKWKGQYDVAVKMIKEGSMSED. . . EFFQEAQTMMKLS. . HPKLVKFYGVCSKEYPI
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI
Template Known Secondary structure  SSS
S

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TT

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   519520.........530.........540.........550.........560.........570.........580.........590........
 
   486...490.........500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ
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Template Sequence  YMVMECGNI. DLNSWLKKK. KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIANQM. . . .
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   599600....... ..610...... ...620.........630.........640.........650...... ...660.........670.
 
   566...570.........580.........590.........600.........610....... ..620.........630.........640...
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Query Sequence  YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYD. . NSQVVLKVSQGHRLYRPHLASDTIYQ
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Template Sequence  . . . . . . . VGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD
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   684.....690.........700.........710........ .720.........730.........740.........750.....
 
   644.....650.........660....
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Query Sequence  IMYSCWHELPEKRPTFQQLLS
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Template Sequence  VLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   767..770.........780.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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