Job Description P51813 Confidence 97.56% Date Fri May 25 10:09:19 BST 2012 Rank 494 Aligned Residues 77 % Identity 21% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	W	F	A	G	N	I	S	R	S	Q	S	E	Q	L	L	R	Q	K	G	K	E	G	A	F	M	V	R	N	S	S	Q	V	G	M	Y	T	V	S	L	F	S	K	A	V	N	D	K	K	G	T	V	K	H	Y	H	V	H	T	N	A	E	N	K	L	Y	L	A	E	N	Y	C	F	D	S	I	P	K	L
Query Conservation
Alig confidence							.														.	.																							.	.	.	.	.												.	.
Template Conservation							.														.	.																							.	.	.	.	.												.	.
Template Sequence		H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	S	R	H	G	Y	C	V	L	V	I	K	F	.	.	.	.	.	A	S	D	V	F	V	H	M	K	I	E	.	.	E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V
Template Known Secondary structure		S	T	T			.														.	.	S	S									S	S	T	T									.	.	.	.	.		T	T									.	.			S	S					T	T				S	S
Template Predicted Secondary structure							.														.	.																							.	.	.	.	.												.	.
Template SS confidence
		792	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.						.	.	.	.	.	.	.	.	840	.	.			.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
		374	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	Y	H	Q	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	V	Y	V	R	P
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		862	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions