Job Description P51813 Confidence 98.30% Date Fri May 25 10:09:19 BST 2012 Rank 469 Aligned Residues 149 % Identity 13% Template c2vrwB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor Resolution 1.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		D	T	K	S	I	L	E	E	L	L	L	K	R	S	Q	Q	K	.	K	K	M	S	P	N	N	Y	K	E	R	L	F	V	L	T	K	T	N	L	S	Y	Y	E	Y	D	K	M	K	R	G	S	R	K	G	S	I	E	I	K	K	I	R	C	V	E	K	V	N	L	E	E	Q	T	P	V	E	R	Q	Y	P	F
Query Conservation																			.
Alig confidence																			.																										.																							.	.	.	.	.	.	.	.	.
Template Conservation																																													.																							.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	S	L	A	N	Y	G	R	P	K	I	D	G	E	L	K	I	T	S	V	E	R	R	S	K	T	D	R	Y	A	F	L	L	D	K	A	L	L	I	C	K	R	.	R	G	D	S	Y	D	L	K	A	S	V	N	L	H	S	F	Q	V	R	D	K	K	.	.	.	.	.	.	.	.	.	W	S	H	M	F
Template Known Secondary structure		S	S		G	G	G	G		S												S	S			S										S	S								.		T	T										T	T	T							T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																													.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.										.	460	.	.	.
		81	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.
Predicted Secondary structure								.	.																									.	.																.																		.	.	.	.	.	.	.
Query SS confidence								.	.																									.	.																.																		.	.	.	.	.	.	.
Query Sequence		Q	I	V	Y	K	D	.	.	G	L	L	Y	V	Y	A	S	N	E	E	S	R	S	Q	W	L	K	A	L	Q	K	E	I	.	.	R	G	N	P	H	L	L	V	K	Y	H	S	G	F	F	.	V	D	G	K	F	L	C	C	Q	Q	S	C	K	A	A	P	G	.	.	.	.	.	.	.	C	T	L	W	E	A
Query Conservation								.	.																									.	.																.																		.	.	.	.	.	.	.
Alig confidence								.	.																									.	.																.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	I	E	D	Q	G	A	Q	G	Y	E	L	F	F	K	T	R	E	L	K	K	K	W	M	E	Q	F	E	M	A	I	S	N	I	Y	P	E	N	A	T	A	N	G	H	D	F	Q	M	F	S	F	E	E	T	T	S	C	K	A	C	Q	M	L	L	R	G	T	F	Y	Q	G	Y	R	C	Y	R	C	R	A
Template Known Secondary structure						T	T		S								S	S																			S		T	T	T	T	G	G	G									S	S			B		T	T	T			B			S	S	S	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		149	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	N	L	H	T	A	V	N	E	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	H	K	E	C	L	G	R	V	P	P
Template Known Secondary structure					G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions