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Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank173Aligned Residues243
% Identity21%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   415....420.........430...... ...440.........450.........460...... ...470.........480.........490..
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Query Sequence  EEITLLKELGSGQFGVVQLGKW. KGQYDVAVKMIKEGSMSEDEFFQEAQTMMK. LSHPKLVKFYGVCSKEYPIYIVTEYI
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Template Sequence  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD. . . PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM
Template Known Secondary structure  TT
SSTTTTTTT

...TTTSTTB


SS

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   420.........430.........440.........450......... 460.........470.........480.........490......
 
   493......500.........510.........520.........530.........540........ .550.........560........
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Query Sequence  SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL. . . . CVKVSDFGMTRYVLDDQYVS
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Template Sequence  KGGELLDKILRQ. KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL
Template Known Secondary structure 
S
BT
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TT
S


GGGSSSS

GGG


TT

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B
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   497..500........ .510.........520.........530.........540.........550.........560.........570.....
 
   569570.........580.........590.........600.........610........ .620.........630... ......640..
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Query Sequence  SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDN. . . SQVVLKVSQGHRLYR. . . PHLASDTIY
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Template Sequence  MTPCYTAN. FVAPEVLERQGYDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK
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   576...580... ......590.........600.........610... ......620.........630.........640.........650...
 
   643......650.........660...
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Query Sequence  QIMYSCWHELPEKRPTFQQLL
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Template Sequence  DLVSKMLHVDPHQRLTAALVL
Template Known Secondary structure  S
SSTTTS

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   654.....660.........670....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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