Return to main results Retrieve Phyre Job Id

Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank260Aligned Residues229
% Identity26%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   419420.........430.........440.........450.........460.........470.........480.........490........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LLKELGSGQFGVVQLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL
Query Conservation      

 
 

 
          



              
      
 
 


             

 
    
 
 
Alig confidence 

















.










.......




























.












Template Conservation 
 
 

 



 

    . 
  



 
 .......    
  

  
 




           .  
        
 
Template Sequence  MEKYLEKVGEGVVYKAKD. SQRIVALKRIS. . . . . . . TAIREISLLKELHHPNIVSLIDVIHSECL. TLVFEFMEKDLKK
Template Known Secondary structure  S
B


B





.




.......


TTB




.

S
Template Predicted Secondary structure 




.

.......











.







Template SS confidence 















































































   20.........30....... ..40........ .50.........60.........70....... ..80.........90
 
   499500.........510.........520.........530.........540.........550.........560.........570........
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKW
Query Conservation    
                      
  

   


 


  



      

 


                      
Alig confidence 





.






































.


























.....
Template Conservation        .                  
                    .                           ..... 
Template Sequence  VLDENK. TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI. NSDALKLADFGLARAFGIPVRVVTLWY. . . . . R
Template Known Secondary structure 
T.T


TT




GGG.






TT
TTS






TT.....
Template Predicted Secondary structure 

.



















.


















.....
Template SS confidence 















































































   108.110... ......120.........130.........140.........150.. .......160.........170......... 180
 
   579580.........590.........600.........610.........620.........630....
Predicted Secondary structure 
























........................
Query SS confidence 























































. . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKVSQGHRLYRP. . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   


           



 
  
 

 
 
  
            
        
........................
Alig confidence 




























.

























........................
Template Conservation                      
    
   .                
                                 
Template Sequence  APDVLMGSKKYSTSVDIWSIGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKP
Template Known Secondary structure 
TT




T.SS
S


SSGGG



TTT
TTGGGSS






B

Template Predicted Secondary structure 


















.






















Template SS confidence 















































































   187..190.........200.........210..... ....220.........230.........240.........250.........260.....
 
   635....640.........650.........660....
Predicted Secondary structure  .....










Query SS confidence  . . . . .





























Query Sequence  . . . . . HLASDTIYQIMYSCWHELPEKRPTFQQLLS
Query Conservation  .....         
   
    
  


   
  
Alig confidence  .....





























Template Conservation          
    


   
  

  


  


 
Template Sequence  WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN
Template Known Secondary structure  STT

S
S
TTTS

T
Template Predicted Secondary structure 










Template SS confidence 


































   266...270.........280.........290.........300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions