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Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank72Aligned Residues245
% Identity23%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   415....420.........430....... ..440....... ..450.........460.........470.........480.........490..
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Query Sequence  EEITLLKELGSGQFGVVQLGKWK. GQYDVAVKMI. KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   493......500.........510.........520.........530.........540.... .....550.........560.........
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Query Sequence  SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV. . . DRDLCVKVSDFGMTRYVLDDQYVSS
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Template Sequence  TGGELFERVVHK. RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT
Template Known Secondary structure 
SGGGGGTTT.SS

TT



SGGGSSSSTT




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TT

B

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   106...110....... ..120.........130.........140.........150.........160.........170.........180....
 
   570.........580.........590.........600.........610.........620.........630.... .....640.......
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Query Sequence  VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKVSQGHRLYRP. . HLASDTIYQIMYS
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Template Sequence  K. . VGTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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   185 ....190.........200 .........210......... 220.........230.........240.........250.........260
 
   648.650.........660....
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Query Sequence  CWHELPEKRPTFQQLLS
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   262.......270........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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