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Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank9Aligned Residues252
% Identity38%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   408.410.........420.........430.........440 .........450.... .....460.........470.........480.
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Query Sequence  GIWELKREEITLLKELGSGQFGVVQLGKWKGQY. . . . DVAVKMIKEGSMSE. . DEFFQEAQTMMKLSHPKLVKFYGVCSK
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Template Sequence  RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT.
Template Known Secondary structure  STTB

GGG

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TTTTSTT


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   413......420.........430.........440.........450.........460.........470.........480.........490.
 
   482.......490.........500.........510.........520.........530.........540.........550.........560.
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Query Sequence  EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV
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Template Sequence  ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR. .
Template Known Secondary structure  SSS


TT
BTTTT

TTT


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SGGGTT






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   492.......500.........510.........520.........530.........540.........550.........560.........
 
   562.......570.........580.........590.........600.........610.........620.........630.........640.
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Query Sequence  LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKVSQGHRLYRPHLASDTI
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Template Sequence  . . . . . . . . . . . . LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL
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GGG





TTS

TTTT

TT





TT

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   584.....590.........600.........610.........620.........630.........640.........650.
 
   642.......650.........660.........670....
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Query Sequence  YQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK
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Template Sequence  YSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK
Template Known Secondary structure  TT
SSGGGS

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   652.......660.........670.........680....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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