Job Description P51813 Confidence 100.00% Date Fri May 25 10:09:19 BST 2012 Rank 20 Aligned Residues 265 % Identity 37% Template c2ivsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain Resolution 2.00 Å

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		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.							.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.			.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																															.	.	.	.	.	.																			.	.
Query SS confidence																															.	.	.	.	.	.																			.	.
Query Sequence		I	W	E	L	K	R	E	E	I	T	L	L	K	E	L	G	S	G	Q	F	G	V	V	Q	L	G	K	W	K	.	.	.	.	.	.	G	Q	Y	D	V	A	V	K	M	I	K	E	G	S	M	S	E	D	.	.	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	S
Query Conservation																															.	.	.	.	.	.																			.	.
Alig confidence																															.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		K	W	E	F	P	R	K	N	L	V	L	G	K	T	L	G	E	G	E	F	G	K	V	V	K	A	T	A	F	H	L	K	G	R	A	G	Y	T	T	V	A	V	K	M	L	K	E	N	A	S	P	S	E	L	R	D	L	L	S	E	F	N	V	L	K	Q	V	N	H	P	H	V	I	K	L	Y	G	A	C	S
Template Known Secondary structure		T	T	B			G	G	G											S	S	S									T	G	G	G		S	S											T	T																	T	T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.								.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		K	E	Y	P	I	Y	I	V	T	E	Y	I	S	N	G	C	L	L	N	Y	L	R	S	H	G	.	.	.	.	.	.	.	K	G	L	E	P	S	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	D	R	D	L	C	V	K	V	S
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	D	G	P	L	L	L	I	V	E	Y	A	K	Y	G	S	L	R	G	F	L	R	E	S	R	K	V	G	P	G	Y	L	R	A	L	T	M	G	D	L	I	S	F	A	W	Q	I	S	Q	G	M	Q	Y	L	A	E	M	K	L	V	H	R	D	L	A	A	R	N	I	L	V	A	E	G	R	K	M	K	I	S
Template Known Secondary structure		S	S	S	S									T	T		B								T	T	T	S	T	T																												T	T							S	G	G	G					T	T	T
Template Predicted Secondary structure
Template SS confidence
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
		554	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		D	F	G	M	T	R	Y	V	L	D	.	D	Q	Y	V	S	S	V	G	T	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	Y	S	S	K	S	D	V	W	A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	S	Q	V	V	L	K	V	S	Q	G	H	R	L	Y
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		D	F	G	L	S	R	D	V	Y	E	E	D	S	Y	V	K	R	S	Q	G	R	I	P	V	K	W	M	A	I	E	S	L	F	D	H	I	Y	T	T	Q	S	D	V	W	S	F	G	V	L	L	W	E	I	V	T	L	G	G	N	P	Y	P	G	I	P	P	E	R	L	F	N	L	L	K	T	G	H	R	M	E
Template Known Secondary structure				T	T					T	T	T	S					S	S				S		G	G	G																													T	T	S			S	S	T	T			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		892	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.
		633	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	H	L	A	S	D	T	I	Y	Q	I	M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S	S	I	E	P	L	R	E	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	D	N	C	S	E	E	M	Y	R	L	M	L	Q	C	W	K	Q	E	P	D	K	R	P	V	F	A	D	I	S	K	D	L	E	K	M	M	V	K	R
Template Known Secondary structure				T	T													T		S	S	G	G	G	S																T
Template Predicted Secondary structure
Template SS confidence
		972	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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