Job Description P51813 Confidence 100.00% Date Fri May 25 10:09:19 BST 2012 Rank 188 Aligned Residues 228 % Identity 24% Template c1zy5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase gcn2; PDBTitle: crystal structure of eif2alpha protein kinase gcn2: r794g2 hyperactivating mutant complexed with amppnp. Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480							.	.	.	.	.	.	.
Predicted Secondary structure																									.																																												.	.	.	.	.	.
Query SS confidence																									.																																												.	.	.	.	.	.
Query Sequence		E	E	I	T	L	L	K	E	L	G	S	G	Q	F	G	V	V	Q	L	G	K	W	K	.	G	Q	Y	D	V	A	V	K	M	I	K	E	G	S	M	S	E	D	E	F	F	Q	E	A	Q	T	M	M	K	L	S	H	P	K	L	V	K	F	Y	G	V	C	S	.	.	.	.	.	.	K	E	Y	P	I	Y	I
Query Conservation																									.																																												.	.	.	.	.	.
Alig confidence																									.																																												.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	F	E	E	I	A	V	L	G	Q	G	A	F	G	Q	V	V	K	A	R	N	A	L	D	S	R	Y	Y	A	I	K	K	I	R	H	T	E	E	K	L	S	T	I	L	S	E	V	M	L	L	A	S	L	N	H	Q	Y	V	V	R	Y	Y	A	A	W	L	E	R	R	N	F	V	K	K	S	T	L	F	I
Template Known Secondary structure														S	S									T	T	T																	T	T	T								T	T				T	T	B												T	T
Template Predicted Secondary structure
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	Y	I	S	N	G	C	L	L	N	Y	L	R	S	H	G	K	G	L	E	P	S	Q	L	L	E	M	C	Y	D	V	C	E	G	M	A	F	L	E	S	H	Q	F	I	H	R	D	L	A	A	R	N	C	L	V	D	R	D	L	C	V	K	V	S	D	F	G	M	T	R	Y	V	L	D	D	Q	Y	V
Query Conservation
Alig confidence																																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	M	E	Y	C	E	N	G	T	L	Y	D	L	I	H	S	E	N	L	N	Q	Q	R	D	E	Y	W	R	L	F	R	Q	I	L	E	A	L	S	Y	I	H	S	Q	G	I	I	H	R	D	L	K	P	M	N	I	F	I	D	E	S	R	N	V	K	I	G	D	F	G	L	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S		B								S		T	T	T	T																					T	T				S				G	G	G					T	T	S						S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.				630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		S	S	V	G	T	K	F	P	V	K	W	S	A	P	E	V	F	H	Y	F	K	Y	S	S	K	S	D	V	W	A	F	G	I	L	M	W	E	V	F	S	L	G	K	Q	P	Y	D	L	Y	D	N	S	Q	V	V	L	K	V	S	Q	G	H	.	.	.	R	L	Y	R	P	H	L	A	S	D	T	I	Y	Q	I
Query Conservation																																																																.	.	.
Alig confidence		.	.	.	.	.	.											.	.	.																						.		.	.																			.	.	.
Template Conservation		.	.	.	.	.	.											.	.	.																						.		.	.
Template Sequence		.	.	.	.	.	.	G	T	A	M	Y	V	A	T	E	V	.	.	.	L	H	Y	N	E	K	I	D	M	Y	S	L	G	I	I	F	F	E	M	I	Y	.	P	.	.	F	S	T	G	M	E	R	V	N	I	L	K	K	L	R	S	V	S	I	E	F	P	P	D	F	D	D	N	K	M	K	V	E	K	K	I
Template Known Secondary structure		.	.	.	.	.	.			G	G	G			T	T	T	.	.	.					T																S	.		.	.		S	S												T	S	T	T					T	T	S		T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.											.	.	.																						.		.	.
Template SS confidence
								886	.	.	.	890	.	.	.	.	.				.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.		.			.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	S	C	W	H	E	L	P	E	K	R	P	T	F	Q	Q	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	L	L	I	D	H	D	P	N	K	R	P	G	A	R	T	L	L	N
Template Known Secondary structure						T		S		G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		958	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions