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Job DescriptionP51813
Confidence100.00%DateFri May 25 10:09:19 BST 2012
Rank116Aligned Residues248
% Identity25%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   412.......420.........430....... ..440........ .450.........460...... ...470.........480.....
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Query Sequence  LKREEITLLKELGSGQFGVVQLGKWK. GQYDVAVKMIK. . . . EGSMSEDEFFQEAQTMMK. LSHPKLVKFYGVCSKEYPI
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL
Template Known Secondary structure 

STT
SSTTT

GGG

STTTTTTTSSTTB


B
SS
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   486...490.........500.........510.........520.........530.........540.........550.........560.....
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Query Sequence  YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ
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Template Sequence  FFVIEYVNGGDLMFHMQRQ. RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG
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S
BTT.SS

TT
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B



TT
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   320.........330........ .340.........350.........360.........370.........380.........390........
 
   566...570.........580.........590.........600.........610.........620.........630.........640.....
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Query Sequence  YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKVSQGHRLYRPHLASDTIYQIM
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Template Sequence  DTTSF. . CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEK. QIRIPRSMSVKAASVL
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B

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GGG

TT

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   399400... ......410.........420.........430........ .440.........450........ .460.........470....
 
   646...650........ .660....
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Query Sequence  YSCWHELPEKRPT. . . . . . FQQLLS
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Template Sequence  KSFLNKDPKERLGCLPQTGFADIQG
Template Known Secondary structure  T
SSSTTSTTTSTTT
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   485....490.........500.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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