Job Description A0PJZ0 Confidence 99.56% Date Wed May 9 17:33:58 BST 2012 Rank 48 Aligned Residues 125 % Identity 21% Template c2rfmB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425; PDBTitle: structure of a thermophilic ankyrin repeat protein Resolution 1.65 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	S	E	L	Q	K	I	H	K	A	A	V	K	G	D	A	A	E	M	E	R	C	L	A	R	R	S	G	D	L	D	A	L	D	K	Q	H	R	T	A	L	H	L	A	C	A	S	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		D	S	Y	N	R	T	P	L	M	V	A	C	M	L	G	M	.	E	N	A	I	D	K	L	V	E	N	F	D	K	L	E	D	K	D	I	E	G	S	T	A	L	I	W	A	V	K	N	N	R	L	G	I	A	E	K	L	L	S	K	G	S	N	V	N	T	K	D	F	S	G	K	T	P	L	M	W	S	I	I
Template Known Secondary structure			T	T												T		.														T	T				T	T	S										T	T											T	T			T	T				T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	V	K	V	V	T	L	L	V	N	R	K	C	Q	I	D	I	Y	D	K	E	N	R	T	P	L	I	Q	A	V	H	C	Q	E	E	A	C	A	V	I	L	L	E	H	G	A	N	P	N	L	K	D	I	Y	G	N	T	A	L	H	Y	A	V	Y	S	E	S	T	S	L	A	E	K	L	L	F	H
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		F	G	Y	S	E	M	S	Y	F	L	L	E	H	G	A	N	V	N	D	R	N	L	E	G	E	T	P	L	I	V	A	S	K	Y	G	R	S	E	I	V	K	K	L	L	E	L	G	A	D	I	S	A	R	D	L	T	G	L	T	A	E	A	S	A	R	I	F	G	R	Q	E	V	I	K	I	F	T	E	V
Template Known Secondary structure			T										T	T	T			S	S				T	T												T											T	T			T	T				T	T	S											T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions