15 c2rfaA_ Probab=99.79   E-value=3.5e-20  Score=116.73  Aligned_columns=125  Identities=16%

Q ss_pred             CHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf             899999980899999997543211121001111111111222222112222211111111222211111112222112--
Q batch____        35 QKIHKAAVKGDAAEMERCLARRSGDLDALDKQHRTALHLACASGHVKVVTLLVNRKCQIDIYDKENRTPLIQAVHCQE--  112 (165)
Q Consensus        35 t~l~~Aa~~g~~~~v~~lL~~~gadin~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  112 (165)
                      ||||+||.+|+.+.|+.||..+|+|+|.++..|.||++.++..+.......+..........................  
T Consensus         4 TpLh~A~~~g~~~~v~~LL~~~gadin~~d~~G~TpLh~A~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (222)
T c2rfaA_           4 SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVI   83 (222)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             77899998099999999999668635567988789999999620022222222222222222222222222222222222


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____       113 --------------------------------------------------------------------------------  112 (165)
Q Consensus       113 --------------------------------------------------------------------------------  112 (165)
                                                                                                      
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (222)
T c2rfaA_          84 NQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQ  163 (222)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf             22222222101368611223455543223453111787101122222222222222222222222222222210000025


Q ss_pred             ------------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             ------------22221111111111223333489899999829999999999878687
Q batch____       113 ------------EACAVILLEHGANPNLKDIYGNTALHYAVYSESTSLAEKLLFHGENI  159 (165)
Q Consensus       113 ------------~~~~~~~~~~~~~~~~~~~~g~TpLh~A~~~g~~eiv~~Ll~~GAdi  159 (165)
                                  ..............+..+..|.||||+|+..|+.++|++||++||||
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~LL~~GAdI  222 (222)
T c2rfaA_         164 PNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI  222 (222)
T ss_dssp             SCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf             86222210012232027656545422468897579899999809999999999789899


