Job Description A0PJZ0 Confidence 99.69% Date Wed May 9 17:33:58 BST 2012 Rank 31 Aligned Residues 149 % Identity 17% Template c2ajaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:ankyrin repeat family protein; PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21. Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																						.						.	.	.																																			.	.	.
Query SS confidence																						.						.	.	.																																			.	.	.
Query Sequence		F	G	F	R	S	R	R	G	Q	T	V	L	G	S	I	D	H	L	Y	T	.	G	S	G	Y	R	.	.	.	I	R	Y	S	E	L	Q	K	I	H	K	A	A	V	K	G	D	A	A	E	M	E	R	C	L	A	R	R	S	G	D	L	D	A	.	.	.	L	D	K	Q	H	R	T	A	L	H	L	A	C	A
Query Conservation																						.						.	.	.																																			.	.	.
Alig confidence											.	.										.						.	.	.																		.																	.	.	.
Template Conservation											.	.																																				.
Template Sequence		F	R	L	A	A	E	N	G	H	.	.	L	H	V	L	N	R	L	C	E	L	A	P	T	E	I	X	A	X	I	Q	A	E	N	Y	H	A	F	R	L	A	A	E	N	G	H	.	L	H	V	L	N	R	L	C	E	L	A	P	T	E	A	T	A	X	I	Q	A	E	N	Y	Y	A	F	R	W	A	A	V	G
Template Known Secondary structure								T	T		.	.										S		T	T	T						S													T	T		.										S		G	G	G																		S	T
Template Predicted Secondary structure											.	.																																				.
Template SS confidence
		132	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	H	V	K	V	V	T	L	L	V	N	R	K	C	Q	I	D	I	Y	D	K	E	N	R	T	P	L	I	Q	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	H	H	N	V	I	N	F	L	L	D	C	P	V	X	L	A	Y	A	E	I	H	E	F	E	Y	G	E	K	Y	V	N	P	F	I	A	R	H	V	N	R	L	K	E	X	H	D	A	F	K	L	S	N	P	D	G	V	F	D	L	V	T	K	S	E	C	L	Q	G	F	Y	X	L	R	N	L	I	R	R
Template Known Secondary structure		T										T	T	S											T	T	T	T	T	T	T	T																	T	T	T	T	T	T	S	S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
								109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	H	C	Q	E	E	A	C	A	V	I	L	L	E	H	G	A	N	P	N	L	K	D	I	Y	G	N	T	A	L	H	Y	A	V	Y	S	E	S	T	S	L	A	E	K	L	L	F	H
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	E	V	L	L	D	D	I	R	F	L	L	S	I	P	G	I	K	A	L	A	P	T	A	T	I	P	G	D	A	N	E	L	L	R	L	A	L	R	L	G	N	Q	G	A	C	A	L	L	L	S	I
Template Known Secondary structure				G	G	G									T	S	T	T	T	G	G	G	S	S			S	S	T	T													T		T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions